Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST3Q8N1M1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.5■□□□□ 0.71
BEST3Q8N1M1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
BEST3Q8N1M1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.5■□□□□ 0.71
BEST3Q8N1M1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BEST3Q8N1M1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 EP400NL-214ENST00000641289 2402 ntBASIC19.49■□□□□ 0.71
BEST3Q8N1M1 CNN2P6-201ENST00000439038 900 ntBASIC19.49■□□□□ 0.71
BEST3Q8N1M1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 AC008175.2-201ENST00000612840 297 ntBASIC19.49■□□□□ 0.71
BEST3Q8N1M1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BEST3Q8N1M1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 AC233723.2-201ENST00000623798 2106 ntBASIC19.48■□□□□ 0.71
BEST3Q8N1M1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 AL121832.2-201ENST00000610979 668 ntBASIC19.48■□□□□ 0.71
BEST3Q8N1M1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BEST3Q8N1M1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 SLC7A5P1-201ENST00000568957 537 ntBASIC19.47■□□□□ 0.71
BEST3Q8N1M1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 AC120498.10-201ENST00000621827 505 ntBASIC19.47■□□□□ 0.71
BEST3Q8N1M1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
BEST3Q8N1M1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.46■□□□□ 0.71
BEST3Q8N1M1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 AC083906.2-201ENST00000511578 360 ntBASIC19.46■□□□□ 0.71
BEST3Q8N1M1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 AC003102.1-202ENST00000563394 1796 ntBASIC19.46■□□□□ 0.71
BEST3Q8N1M1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
BEST3Q8N1M1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 TERF1P5-201ENST00000477545 1207 ntBASIC19.45■□□□□ 0.7
BEST3Q8N1M1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 AC013268.1-206ENST00000638368 961 ntBASIC19.45■□□□□ 0.7
BEST3Q8N1M1 AC112229.1-201ENST00000639295 961 ntBASIC19.45■□□□□ 0.7
BEST3Q8N1M1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
BEST3Q8N1M1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.44■□□□□ 0.7
BEST3Q8N1M1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BEST3Q8N1M1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BEST3Q8N1M1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms