Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM48Q8IWZ4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 FAM99A-202ENST00000538190 1989 ntBASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM48Q8IWZ4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM48Q8IWZ4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM48Q8IWZ4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM48Q8IWZ4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 AC006970.2-201ENST00000450065 779 ntBASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM48Q8IWZ4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM48Q8IWZ4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 SLC7A5P2-201ENST00000553010 536 ntBASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 AC231657.2-201ENST00000624556 255 ntBASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM48Q8IWZ4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms