Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NFE4Q86UQ8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFE4Q86UQ8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NFE4Q86UQ8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 AC105265.2-201ENST00000467189 838 ntBASIC14.96□□□□□ -0.01
NFE4Q86UQ8 LINC01529-204ENST00000636474 1715 ntBASIC14.96□□□□□ -0.01
NFE4Q86UQ8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NFE4Q86UQ8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
NFE4Q86UQ8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NFE4Q86UQ8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
NFE4Q86UQ8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
NFE4Q86UQ8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NFE4Q86UQ8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 AC099791.1-201ENST00000416440 715 ntBASIC14.95□□□□□ -0.02
NFE4Q86UQ8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NFE4Q86UQ8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 AC126544.1-201ENST00000580842 1059 ntBASIC14.94□□□□□ -0.02
NFE4Q86UQ8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 AL499627.2-201ENST00000606283 725 ntBASIC14.94□□□□□ -0.02
NFE4Q86UQ8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.94□□□□□ -0.02
NFE4Q86UQ8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 AC133637.1-201ENST00000624115 1537 ntBASIC14.93□□□□□ -0.02
NFE4Q86UQ8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.93□□□□□ -0.02
NFE4Q86UQ8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NFE4Q86UQ8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms