Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 AC010331.1-201ENST00000611423 582 ntBASIC13.1□□□□□ -0.31
VPS13BQ7Z7G8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AC069236.1-201ENST00000604339 616 ntBASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AC010980.2-201ENST00000587099 1412 ntBASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 AL034346.1-201ENST00000568244 1277 ntBASIC13.09□□□□□ -0.31
VPS13BQ7Z7G8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VPS13BQ7Z7G8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.08□□□□□ -0.32
VPS13BQ7Z7G8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 AL355472.2-201ENST00000422958 438 ntBASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 RPPH1-201ENST00000516869 333 ntBASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.07□□□□□ -0.32
VPS13BQ7Z7G8 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.06□□□□□ -0.32
VPS13BQ7Z7G8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms