Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 AC010980.2-201ENST00000587099 1412 ntBASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 AC091874.3-201ENST00000512672 1195 ntBASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.04■□□□□ 0.48
RAI1Q7Z5J4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 AC243732.1-201ENST00000612648 864 ntBASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.03■□□□□ 0.48
RAI1Q7Z5J4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RAI1Q7Z5J4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.02■□□□□ 0.47
RAI1Q7Z5J4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AL117328.2-201ENST00000624617 1940 ntBASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 PRORSD1P-201ENST00000295112 541 ntBASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AC120498.10-201ENST00000621827 505 ntBASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 ECEL1P1-201ENST00000373592 1742 ntBASIC18.01■□□□□ 0.47
RAI1Q7Z5J4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18■□□□□ 0.47
RAI1Q7Z5J4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18■□□□□ 0.47
RAI1Q7Z5J4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms