Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COLCA1Q6ZS62 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 AC097381.1-201ENST00000429019 1296 ntBASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 AC010141.2-201ENST00000452426 721 ntBASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 AP004607.4-201ENST00000530158 1459 ntBASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 AC061975.6-201ENST00000579045 1553 ntBASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COLCA1Q6ZS62 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 AC008175.2-201ENST00000612840 297 ntBASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 MIR6821-201ENST00000617625 74 ntBASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COLCA1Q6ZS62 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L2-201ENST00000561772 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 AC104187.1-201ENST00000607510 612 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L6-201ENST00000626483 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L1-201ENST00000627662 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L8-201ENST00000629013 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L3-201ENST00000630187 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L7-201ENST00000630678 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 DUX4L5-201ENST00000630834 1275 ntBASIC18.1■□□□□ 0.49
COLCA1Q6ZS62 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COLCA1Q6ZS62 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
COLCA1Q6ZS62 AC004854.2-201ENST00000608450 1441 ntBASIC18.08■□□□□ 0.49
COLCA1Q6ZS62 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
COLCA1Q6ZS62 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COLCA1Q6ZS62 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 AP001160.3-201ENST00000601484 763 ntBASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms