Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 RN7SL471P-201ENST00000580476 299 ntBASIC23.26■■□□□ 1.31
TRIM60Q495X7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM60Q495X7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.26■■□□□ 1.31
TRIM60Q495X7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
TRIM60Q495X7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
TRIM60Q495X7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM60Q495X7 KRT17P3-201ENST00000420566 1262 ntBASIC23.25■■□□□ 1.31
TRIM60Q495X7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM60Q495X7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM60Q495X7 PNMA6B-201ENST00000538162 1200 ntBASIC23.25■■□□□ 1.31
TRIM60Q495X7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.25■■□□□ 1.31
TRIM60Q495X7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.25■■□□□ 1.31
TRIM60Q495X7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM60Q495X7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TRIM60Q495X7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM60Q495X7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
TRIM60Q495X7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM60Q495X7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
TRIM60Q495X7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
TRIM60Q495X7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM60Q495X7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM60Q495X7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIM60Q495X7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM60Q495X7 LINC01023-201ENST00000606054 436 ntBASIC23.22■■□□□ 1.31
TRIM60Q495X7 FAM21FP-204ENST00000608637 956 ntBASIC23.22■■□□□ 1.31
TRIM60Q495X7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.22■■□□□ 1.31
TRIM60Q495X7 AC092368.3-202ENST00000574180 1591 ntBASIC23.22■■□□□ 1.31
TRIM60Q495X7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM60Q495X7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM60Q495X7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM60Q495X7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM60Q495X7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM60Q495X7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
TRIM60Q495X7 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM60Q495X7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TRIM60Q495X7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM60Q495X7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM60Q495X7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM60Q495X7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
TRIM60Q495X7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM60Q495X7 KRT18P21-201ENST00000515767 1272 ntBASIC23.2■■□□□ 1.3
TRIM60Q495X7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM60Q495X7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM60Q495X7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.19■■□□□ 1.3
TRIM60Q495X7 AC091799.1-201ENST00000422823 811 ntBASIC23.19■■□□□ 1.3
TRIM60Q495X7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.19■■□□□ 1.3
TRIM60Q495X7 AC069544.1-201ENST00000609399 999 ntBASIC23.19■■□□□ 1.3
TRIM60Q495X7 AL589743.5-201ENST00000616611 1050 ntBASIC23.19■■□□□ 1.3
TRIM60Q495X7 AC100791.3-201ENST00000617619 330 ntBASIC23.19■■□□□ 1.3
TRIM60Q495X7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM60Q495X7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms