Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK3Q00526 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDK3Q00526 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK3Q00526 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDK3Q00526 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK3Q00526 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.76■□□□□ 0.91
CDK3Q00526 AC005181.1-201ENST00000604782 1256 ntBASIC20.76■□□□□ 0.91
CDK3Q00526 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK3Q00526 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.76■□□□□ 0.91
CDK3Q00526 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDK3Q00526 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK3Q00526 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDK3Q00526 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK3Q00526 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.75■□□□□ 0.91
CDK3Q00526 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.75■□□□□ 0.91
CDK3Q00526 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK3Q00526 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.75■□□□□ 0.91
CDK3Q00526 AL050303.2-201ENST00000619798 666 ntBASIC20.75■□□□□ 0.91
CDK3Q00526 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
CDK3Q00526 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDK3Q00526 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK3Q00526 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CDK3Q00526 EP400NL-214ENST00000641289 2402 ntBASIC20.74■□□□□ 0.91
CDK3Q00526 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDK3Q00526 HLA-L-209ENST00000420110 1011 ntBASIC20.74■□□□□ 0.91
CDK3Q00526 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.74■□□□□ 0.91
CDK3Q00526 AC007322.4-201ENST00000509611 723 ntBASIC20.74■□□□□ 0.91
CDK3Q00526 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.74■□□□□ 0.91
CDK3Q00526 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CDK3Q00526 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDK3Q00526 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.73■□□□□ 0.91
CDK3Q00526 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
CDK3Q00526 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK3Q00526 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDK3Q00526 RBM17P2-201ENST00000616397 1405 ntBASIC20.73■□□□□ 0.91
CDK3Q00526 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.73■□□□□ 0.91
CDK3Q00526 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDK3Q00526 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CDK3Q00526 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDK3Q00526 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 NCF1B-203ENST00000435988 1254 ntBASIC20.72■□□□□ 0.91
CDK3Q00526 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK3Q00526 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDK3Q00526 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDK3Q00526 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CDK3Q00526 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.72■□□□□ 0.91
CDK3Q00526 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDK3Q00526 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK3Q00526 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK3Q00526 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK3Q00526 AC243732.1-201ENST00000612648 864 ntBASIC20.71■□□□□ 0.91
CDK3Q00526 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDK3Q00526 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDK3Q00526 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.71■□□□□ 0.91
CDK3Q00526 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK3Q00526 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDK3Q00526 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDK3Q00526 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK3Q00526 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CDK3Q00526 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.7■□□□□ 0.9
CDK3Q00526 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CDK3Q00526 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDK3Q00526 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.7■□□□□ 0.9
CDK3Q00526 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CDK3Q00526 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CDK3Q00526 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDK3Q00526 AC068338.2-201ENST00000563278 1430 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms