Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.31■□□□□ 0.36
SRPXP78539 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRPXP78539 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPXP78539 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.3■□□□□ 0.36
SRPXP78539 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRPXP78539 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
SRPXP78539 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRPXP78539 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPXP78539 AC012354.3-201ENST00000623734 483 ntBASIC17.3■□□□□ 0.36
SRPXP78539 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SRPXP78539 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPXP78539 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRPXP78539 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRPXP78539 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRPXP78539 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SRPXP78539 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.29■□□□□ 0.36
SRPXP78539 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.29■□□□□ 0.36
SRPXP78539 AC010997.5-201ENST00000609182 354 ntBASIC17.29■□□□□ 0.36
SRPXP78539 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SRPXP78539 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.29■□□□□ 0.36
SRPXP78539 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRPXP78539 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.28■□□□□ 0.36
SRPXP78539 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.28■□□□□ 0.36
SRPXP78539 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 AC003102.1-202ENST00000563394 1796 ntBASIC17.28■□□□□ 0.36
SRPXP78539 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRPXP78539 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SRPXP78539 pRNA.6-201ENST00000610482 90 ntBASIC17.28■□□□□ 0.36
SRPXP78539 pRNA.5-201ENST00000612139 90 ntBASIC17.28■□□□□ 0.36
SRPXP78539 pRNA.11-201ENST00000618423 90 ntBASIC17.28■□□□□ 0.36
SRPXP78539 pRNA.13-201ENST00000619112 90 ntBASIC17.28■□□□□ 0.36
SRPXP78539 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRPXP78539 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SRPXP78539 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRPXP78539 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SRPXP78539 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.27■□□□□ 0.36
SRPXP78539 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.27■□□□□ 0.36
SRPXP78539 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SRPXP78539 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
SRPXP78539 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SRPXP78539 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 OR2I1P-207ENST00000453522 948 ntBASIC17.27■□□□□ 0.36
SRPXP78539 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.27■□□□□ 0.36
SRPXP78539 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRPXP78539 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRPXP78539 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.27■□□□□ 0.35
SRPXP78539 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SRPXP78539 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRPXP78539 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.27■□□□□ 0.35
SRPXP78539 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SRPXP78539 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SRPXP78539 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SRPXP78539 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SRPXP78539 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRPXP78539 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SRPXP78539 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SRPXP78539 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.25■□□□□ 0.35
SRPXP78539 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.25■□□□□ 0.35
SRPXP78539 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRPXP78539 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.25■□□□□ 0.35
SRPXP78539 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRPXP78539 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRPXP78539 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRPXP78539 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms