Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.89■□□□□ 0.29
CX3CL1P78423 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.88■□□□□ 0.29
CX3CL1P78423 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CX3CL1P78423 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.88■□□□□ 0.29
CX3CL1P78423 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CX3CL1P78423 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.88■□□□□ 0.29
CX3CL1P78423 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CX3CL1P78423 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.88■□□□□ 0.29
CX3CL1P78423 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CX3CL1P78423 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CX3CL1P78423 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CX3CL1P78423 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CX3CL1P78423 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.87■□□□□ 0.29
CX3CL1P78423 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.87■□□□□ 0.29
CX3CL1P78423 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CX3CL1P78423 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CL1P78423 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.86■□□□□ 0.29
CX3CL1P78423 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.86■□□□□ 0.29
CX3CL1P78423 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.86■□□□□ 0.29
CX3CL1P78423 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CL1P78423 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CL1P78423 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CX3CL1P78423 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CX3CL1P78423 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.86■□□□□ 0.29
CX3CL1P78423 AC092667.1-201ENST00000434301 2586 ntBASIC16.86■□□□□ 0.29
CX3CL1P78423 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.86■□□□□ 0.29
CX3CL1P78423 LINC02228-203ENST00000641970 1355 ntBASIC16.86■□□□□ 0.29
CX3CL1P78423 AC244015.2-201ENST00000616358 1861 ntBASIC16.86■□□□□ 0.29
CX3CL1P78423 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.86■□□□□ 0.29
CX3CL1P78423 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CX3CL1P78423 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CL1P78423 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.85■□□□□ 0.29
CX3CL1P78423 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 AC123595.1-201ENST00000440769 1046 ntBASIC16.85■□□□□ 0.29
CX3CL1P78423 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 AC019069.1-201ENST00000610008 1333 ntBASIC16.85■□□□□ 0.29
CX3CL1P78423 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CL1P78423 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.85■□□□□ 0.29
CX3CL1P78423 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CX3CL1P78423 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.84■□□□□ 0.29
CX3CL1P78423 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.84■□□□□ 0.29
CX3CL1P78423 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CL1P78423 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CX3CL1P78423 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CX3CL1P78423 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.84■□□□□ 0.29
CX3CL1P78423 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.84■□□□□ 0.29
CX3CL1P78423 YBX1P1-201ENST00000445822 960 ntBASIC16.84■□□□□ 0.29
CX3CL1P78423 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms