Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDN18P56856 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.85■□□□□ 0.61
CLDN18P56856 AC013268.1-206ENST00000638368 961 ntBASIC18.85■□□□□ 0.61
CLDN18P56856 AC112229.1-201ENST00000639295 961 ntBASIC18.85■□□□□ 0.61
CLDN18P56856 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN18P56856 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
CLDN18P56856 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLDN18P56856 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN18P56856 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN18P56856 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN18P56856 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN18P56856 AL050303.2-201ENST00000619798 666 ntBASIC18.84■□□□□ 0.61
CLDN18P56856 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN18P56856 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN18P56856 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN18P56856 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN18P56856 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.83■□□□□ 0.61
CLDN18P56856 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN18P56856 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN18P56856 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.83■□□□□ 0.6
CLDN18P56856 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.83■□□□□ 0.6
CLDN18P56856 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN18P56856 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN18P56856 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN18P56856 AC005181.1-201ENST00000604782 1256 ntBASIC18.83■□□□□ 0.6
CLDN18P56856 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN18P56856 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN18P56856 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLDN18P56856 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN18P56856 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CLDN18P56856 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN18P56856 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN18P56856 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN18P56856 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN18P56856 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN18P56856 AC007322.4-201ENST00000509611 723 ntBASIC18.82■□□□□ 0.6
CLDN18P56856 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN18P56856 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN18P56856 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN18P56856 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN18P56856 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN18P56856 RBM17P2-201ENST00000616397 1405 ntBASIC18.82■□□□□ 0.6
CLDN18P56856 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN18P56856 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN18P56856 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN18P56856 EP400NL-214ENST00000641289 2402 ntBASIC18.81■□□□□ 0.6
CLDN18P56856 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN18P56856 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN18P56856 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN18P56856 HLA-L-209ENST00000420110 1011 ntBASIC18.81■□□□□ 0.6
CLDN18P56856 NCF1B-203ENST00000435988 1254 ntBASIC18.81■□□□□ 0.6
CLDN18P56856 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN18P56856 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN18P56856 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN18P56856 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN18P56856 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN18P56856 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN18P56856 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN18P56856 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN18P56856 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CLDN18P56856 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN18P56856 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN18P56856 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN18P56856 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN18P56856 AC243732.1-201ENST00000612648 864 ntBASIC18.8■□□□□ 0.6
CLDN18P56856 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CLDN18P56856 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN18P56856 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN18P56856 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLDN18P56856 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDN18P56856 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms