Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA1P56159 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA1P56159 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA1P56159 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA1P56159 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.91■□□□□ 0.62
GFRA1P56159 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
GFRA1P56159 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.91■□□□□ 0.62
GFRA1P56159 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.91■□□□□ 0.62
GFRA1P56159 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GFRA1P56159 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
GFRA1P56159 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GFRA1P56159 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.9■□□□□ 0.62
GFRA1P56159 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
GFRA1P56159 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
GFRA1P56159 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 MIR663A-201ENST00000385250 93 ntBASIC18.9■□□□□ 0.62
GFRA1P56159 AC006970.2-201ENST00000450065 779 ntBASIC18.9■□□□□ 0.62
GFRA1P56159 AC007322.4-201ENST00000509611 723 ntBASIC18.9■□□□□ 0.62
GFRA1P56159 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.9■□□□□ 0.62
GFRA1P56159 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.9■□□□□ 0.62
GFRA1P56159 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.9■□□□□ 0.62
GFRA1P56159 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.9■□□□□ 0.62
GFRA1P56159 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GFRA1P56159 RBM17P2-201ENST00000616397 1405 ntBASIC18.9■□□□□ 0.62
GFRA1P56159 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
GFRA1P56159 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GFRA1P56159 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
GFRA1P56159 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
GFRA1P56159 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
GFRA1P56159 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
GFRA1P56159 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.89■□□□□ 0.61
GFRA1P56159 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
GFRA1P56159 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.89■□□□□ 0.61
GFRA1P56159 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
GFRA1P56159 ID1-201ENST00000376105 1233 ntBASIC18.89■□□□□ 0.61
GFRA1P56159 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.89■□□□□ 0.61
GFRA1P56159 AC243732.1-201ENST00000612648 864 ntBASIC18.89■□□□□ 0.61
GFRA1P56159 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.89■□□□□ 0.61
GFRA1P56159 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.89■□□□□ 0.61
GFRA1P56159 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
GFRA1P56159 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GFRA1P56159 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
GFRA1P56159 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.88■□□□□ 0.61
GFRA1P56159 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.88■□□□□ 0.61
GFRA1P56159 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.88■□□□□ 0.61
GFRA1P56159 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
GFRA1P56159 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.88■□□□□ 0.61
GFRA1P56159 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.88■□□□□ 0.61
GFRA1P56159 AL050303.2-201ENST00000619798 666 ntBASIC18.88■□□□□ 0.61
GFRA1P56159 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
GFRA1P56159 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.88■□□□□ 0.61
GFRA1P56159 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GFRA1P56159 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA1P56159 NCF1B-203ENST00000435988 1254 ntBASIC18.87■□□□□ 0.61
GFRA1P56159 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.87■□□□□ 0.61
GFRA1P56159 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA1P56159 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
GFRA1P56159 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.87■□□□□ 0.61
GFRA1P56159 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA1P56159 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.87■□□□□ 0.61
GFRA1P56159 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
GFRA1P56159 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
GFRA1P56159 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GFRA1P56159 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
GFRA1P56159 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
GFRA1P56159 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GFRA1P56159 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms