Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 YER181CYER181C 324 nt4.9□□□□□ -1.63
UFD2P54860 YGL039WYGL039W 1047 nt4.9□□□□□ -1.63
UFD2P54860 RTS3YGR161C 792 nt4.9□□□□□ -1.63
UFD2P54860 YOR053WYOR053W 342 nt4.9□□□□□ -1.63
UFD2P54860 AGE2YIL044C 897 nt4.89□□□□□ -1.63
UFD2P54860 GPP1YIL053W 753 nt4.89□□□□□ -1.63
UFD2P54860 YBR126W-AYBR126W-A 207 nt4.89□□□□□ -1.63
UFD2P54860 YBR285WYBR285W 435 nt4.89□□□□□ -1.63
UFD2P54860 NUP2YLR335W 2163 nt4.89□□□□□ -1.63
UFD2P54860 OAF1YAL051W 3144 nt4.89□□□□□ -1.63
UFD2P54860 STE24YJR117W 1362 nt4.89□□□□□ -1.63
UFD2P54860 GAL4YPL248C 2646 nt4.89□□□□□ -1.63
UFD2P54860 RAD52YML032C 1416 nt4.89□□□□□ -1.63
UFD2P54860 MSC7YHR039C 1935 nt4.88□□□□□ -1.63
UFD2P54860 DAL5YJR152W 1632 nt4.88□□□□□ -1.63
UFD2P54860 HUL5YGL141W 2733 nt4.88□□□□□ -1.63
UFD2P54860 TMA17YDL110C 453 nt4.88□□□□□ -1.63
UFD2P54860 IRC18YJL037W 675 nt4.88□□□□□ -1.63
UFD2P54860 RPL40BYKR094C 387 nt4.88□□□□□ -1.63
UFD2P54860 IDP2YLR174W 1239 nt4.88□□□□□ -1.63
UFD2P54860 RPS1AYLR441C 768 nt4.88□□□□□ -1.63
UFD2P54860 YML108WYML108W 318 nt4.88□□□□□ -1.63
UFD2P54860 YNL089CYNL089C 477 nt4.88□□□□□ -1.63
UFD2P54860 YBR062CYBR062C 543 nt4.88□□□□□ -1.63
UFD2P54860 AIM4YBR194W 372 nt4.88□□□□□ -1.63
UFD2P54860 KIN2YLR096W 3444 nt4.88□□□□□ -1.63
UFD2P54860 YHR214C-CYHR214C-C 1437 nt4.88□□□□□ -1.63
UFD2P54860 ADP1YCR011C 3150 nt4.88□□□□□ -1.63
UFD2P54860 snR59snR59 78 nt4.87□□□□□ -1.63
UFD2P54860 RPL34AYER056C-A 366 nt4.87□□□□□ -1.63
UFD2P54860 VFA1YER128W 612 nt4.87□□□□□ -1.63
UFD2P54860 BUD13YGL174W 801 nt4.87□□□□□ -1.63
UFD2P54860 RPS4BYHR203C 786 nt4.87□□□□□ -1.63
UFD2P54860 RPS4AYJR145C 786 nt4.87□□□□□ -1.63
UFD2P54860 YKE2YLR200W 345 nt4.87□□□□□ -1.63
UFD2P54860 FLD1YLR404W 858 nt4.87□□□□□ -1.63
UFD2P54860 CMC2YBL059C-A 330 nt4.87□□□□□ -1.63
UFD2P54860 YOR331CYOR331C 558 nt4.87□□□□□ -1.63
UFD2P54860 MRPL40YPL173W 894 nt4.87□□□□□ -1.63
UFD2P54860 SWC4YGR002C 1431 nt4.87□□□□□ -1.63
UFD2P54860 NCS2YNL119W 1482 nt4.87□□□□□ -1.63
UFD2P54860 MNT4YNR059W 1743 nt4.86□□□□□ -1.63
UFD2P54860 MET4YNL103W 2019 nt4.86□□□□□ -1.63
UFD2P54860 YDR340WYDR340W 303 nt4.86□□□□□ -1.63
UFD2P54860 SEC53YFL045C 765 nt4.86□□□□□ -1.63
UFD2P54860 SIL1YOL031C 1266 nt4.86□□□□□ -1.63
UFD2P54860 VAM10YOR068C 345 nt4.86□□□□□ -1.63
UFD2P54860 AFT2YPL202C 1251 nt4.86□□□□□ -1.63
UFD2P54860 MBA1YBR185C 837 nt4.86□□□□□ -1.63
UFD2P54860 SBE2YDR351W 2595 nt4.86□□□□□ -1.63
UFD2P54860 YBR238CYBR238C 2196 nt4.85□□□□□ -1.63
UFD2P54860 YDR262WYDR262W 819 nt4.85□□□□□ -1.63
UFD2P54860 CPR5YDR304C 678 nt4.85□□□□□ -1.63
UFD2P54860 SPT2YER161C 1002 nt4.85□□□□□ -1.63
UFD2P54860 YHI9YHR029C 885 nt4.85□□□□□ -1.63
UFD2P54860 BET3YKR068C 582 nt4.85□□□□□ -1.63
UFD2P54860 TDA8YAL064C-A 381 nt4.85□□□□□ -1.63
UFD2P54860 YOR131CYOR131C 657 nt4.85□□□□□ -1.63
UFD2P54860 EPO1YMR124W 2832 nt4.84□□□□□ -1.63
UFD2P54860 SHE4YOR035C 2370 nt4.84□□□□□ -1.63
UFD2P54860 YML096WYML096W 1578 nt4.84□□□□□ -1.63
UFD2P54860 ORC6YHR118C 1308 nt4.84□□□□□ -1.63
UFD2P54860 YNL284C-AYNL284C-A 1323 nt4.84□□□□□ -1.63
UFD2P54860 PET54YGR222W 882 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)CtQ(UUG)C 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)D1tQ(UUG)D1 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)D2tQ(UUG)D2 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)D3tQ(UUG)D3 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)E1tQ(UUG)E1 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)HtQ(UUG)H 72 nt4.84□□□□□ -1.63
UFD2P54860 tQ(UUG)LtQ(UUG)L 72 nt4.84□□□□□ -1.63
UFD2P54860 ECM34YHL043W 513 nt4.84□□□□□ -1.63
UFD2P54860 BIG1YHR101C 1008 nt4.84□□□□□ -1.63
UFD2P54860 YIL171WYIL171W 330 nt4.84□□□□□ -1.63
UFD2P54860 RIO2YNL207W 1278 nt4.84□□□□□ -1.63
UFD2P54860 MPD2YOL088C 834 nt4.84□□□□□ -1.63
UFD2P54860 DDP1YOR163W 567 nt4.84□□□□□ -1.63
UFD2P54860 YPR096CYPR096C 303 nt4.84□□□□□ -1.63
UFD2P54860 HOT1YMR172W 2160 nt4.84□□□□□ -1.64
UFD2P54860 BBC1YJL020C 3474 nt4.84□□□□□ -1.64
UFD2P54860 CIT1YNR001C 1440 nt4.83□□□□□ -1.64
UFD2P54860 OTU1YFL044C 906 nt4.83□□□□□ -1.64
UFD2P54860 YGR269WYGR269W 327 nt4.83□□□□□ -1.64
UFD2P54860 YIL014C-AYIL014C-A 315 nt4.83□□□□□ -1.64
UFD2P54860 EFB1YAL003W 621 nt4.83□□□□□ -1.64
UFD2P54860 HIT1YJR055W 495 nt4.83□□□□□ -1.64
UFD2P54860 PAM1YDR251W 2493 nt4.83□□□□□ -1.64
UFD2P54860 BRE4YDL231C 3378 nt4.82□□□□□ -1.64
UFD2P54860 YMR018WYMR018W 1545 nt4.82□□□□□ -1.64
UFD2P54860 YDL199CYDL199C 2064 nt4.82□□□□□ -1.64
UFD2P54860 HFA1YMR207C 6372 nt4.82□□□□□ -1.64
UFD2P54860 SSL1YLR005W 1386 nt4.82□□□□□ -1.64
UFD2P54860 SLK19YOR195W 2466 nt4.82□□□□□ -1.64
UFD2P54860 SWP82YFL049W 1872 nt4.82□□□□□ -1.64
UFD2P54860 snR68snR68 136 nt4.82□□□□□ -1.64
UFD2P54860 GPI19YDR437W 423 nt4.82□□□□□ -1.64
UFD2P54860 SLX8YER116C 825 nt4.82□□□□□ -1.64
UFD2P54860 YIL021C-AYIL021C-A 270 nt4.82□□□□□ -1.64
UFD2P54860 RDN5-1RDN5-1 121 nt4.82□□□□□ -1.64
UFD2P54860 ECM4YKR076W 1113 nt4.82□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms