Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PTPN5P54829 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 AC093787.1-201ENST00000450396 207 ntBASIC21.76■■□□□ 1.07
PTPN5P54829 SNORA78-201ENST00000459373 127 ntBASIC21.76■■□□□ 1.07
PTPN5P54829 TERF1P5-201ENST00000477545 1207 ntBASIC21.76■■□□□ 1.07
PTPN5P54829 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PTPN5P54829 AC091874.3-201ENST00000512672 1195 ntBASIC21.76■■□□□ 1.07
PTPN5P54829 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTPN5P54829 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.76■■□□□ 1.07
PTPN5P54829 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 FAM197Y4-202ENST00000622692 608 ntBASIC21.76■■□□□ 1.07
PTPN5P54829 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.76■■□□□ 1.07
PTPN5P54829 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.76■■□□□ 1.07
PTPN5P54829 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTPN5P54829 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PTPN5P54829 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN5P54829 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTPN5P54829 AC009237.3-201ENST00000393279 1427 ntBASIC21.75■■□□□ 1.07
PTPN5P54829 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTPN5P54829 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN5P54829 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.75■■□□□ 1.07
PTPN5P54829 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTPN5P54829 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PTPN5P54829 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.75■■□□□ 1.07
PTPN5P54829 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTPN5P54829 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN5P54829 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PTPN5P54829 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.74■■□□□ 1.07
PTPN5P54829 AC007322.4-201ENST00000509611 723 ntBASIC21.74■■□□□ 1.07
PTPN5P54829 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.74■■□□□ 1.07
PTPN5P54829 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.74■■□□□ 1.07
PTPN5P54829 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN5P54829 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.74■■□□□ 1.07
PTPN5P54829 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTPN5P54829 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.73■■□□□ 1.07
PTPN5P54829 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.73■■□□□ 1.07
PTPN5P54829 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 AC016405.3-201ENST00000607710 860 ntBASIC21.73■■□□□ 1.07
PTPN5P54829 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTPN5P54829 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
PTPN5P54829 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PTPN5P54829 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN5P54829 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN5P54829 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.72■■□□□ 1.07
PTPN5P54829 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN5P54829 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN5P54829 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.72■■□□□ 1.07
PTPN5P54829 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.72■■□□□ 1.07
PTPN5P54829 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTPN5P54829 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PTPN5P54829 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PTPN5P54829 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PTPN5P54829 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.71■■□□□ 1.07
PTPN5P54829 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.71■■□□□ 1.07
PTPN5P54829 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PTPN5P54829 AC079089.2-201ENST00000531211 1277 ntBASIC21.71■■□□□ 1.07
PTPN5P54829 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.71■■□□□ 1.07
PTPN5P54829 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTPN5P54829 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.7■■□□□ 1.07
PTPN5P54829 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTPN5P54829 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTPN5P54829 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.7■■□□□ 1.06
PTPN5P54829 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms