Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YNR062CYNR062C 984 nt2.74□□□□□ -1.97
YNL040WP53960 TUM1YOR251C 915 nt2.74□□□□□ -1.97
YNL040WP53960 YPL276WYPL276W 438 nt2.74□□□□□ -1.97
YNL040WP53960 YPR203WYPR203W 309 nt2.74□□□□□ -1.97
YNL040WP53960 NAB3YPL190C 2409 nt2.74□□□□□ -1.97
YNL040WP53960 PHO81YGR233C 3537 nt2.74□□□□□ -1.97
YNL040WP53960 EMP70YLR083C 2004 nt2.73□□□□□ -1.97
YNL040WP53960 PSP1YDR505C 2526 nt2.73□□□□□ -1.97
YNL040WP53960 YDR535CYDR535C 501 nt2.73□□□□□ -1.97
YNL040WP53960 VMA8YEL051W 771 nt2.73□□□□□ -1.97
YNL040WP53960 MPC3YGR243W 441 nt2.73□□□□□ -1.97
YNL040WP53960 BMT5YIL096C 1011 nt2.73□□□□□ -1.97
YNL040WP53960 YIL161WYIL161W 708 nt2.73□□□□□ -1.97
YNL040WP53960 YKR011CYKR011C 1062 nt2.73□□□□□ -1.97
YNL040WP53960 GSP1YLR293C 660 nt2.73□□□□□ -1.97
YNL040WP53960 HHF2YNL030W 312 nt2.73□□□□□ -1.97
YNL040WP53960 YIP3YNL044W 531 nt2.73□□□□□ -1.97
YNL040WP53960 NMA111YNL123W 2994 nt2.73□□□□□ -1.97
YNL040WP53960 YOL038C-AYOL038C-A 96 nt2.73□□□□□ -1.97
YNL040WP53960 YOR062CYOR062C 807 nt2.73□□□□□ -1.97
YNL040WP53960 POL30YBR088C 777 nt2.73□□□□□ -1.97
YNL040WP53960 MPS1YDL028C 2295 nt2.72□□□□□ -1.97
YNL040WP53960 PLP1YDR183W 693 nt2.72□□□□□ -1.97
YNL040WP53960 YFR032C-BYFR032C-B 264 nt2.72□□□□□ -1.97
YNL040WP53960 MPS2YGL075C 1164 nt2.72□□□□□ -1.97
YNL040WP53960 KEL2YGR238C 2649 nt2.72□□□□□ -1.97
YNL040WP53960 YLR400WYLR400W 474 nt2.72□□□□□ -1.97
YNL040WP53960 ATG34YOL083W 1239 nt2.72□□□□□ -1.97
YNL040WP53960 PNO1YOR145C 825 nt2.72□□□□□ -1.97
YNL040WP53960 JSN1YJR091C 3276 nt2.72□□□□□ -1.97
YNL040WP53960 HBT1YDL223C 3141 nt2.72□□□□□ -1.97
YNL040WP53960 VPS9YML097C 1356 nt2.72□□□□□ -1.97
YNL040WP53960 NFT1YKR103W 3657 nt2.72□□□□□ -1.97
YNL040WP53960 IRC3YDR332W 2070 nt2.72□□□□□ -1.97
YNL040WP53960 VPS3YDR495C 3036 nt2.71□□□□□ -1.97
YNL040WP53960 HFM1YGL251C 3564 nt2.71□□□□□ -1.97
YNL040WP53960 KAR1YNL188W 1302 nt2.71□□□□□ -1.98
YNL040WP53960 YJL132WYJL132W 2253 nt2.71□□□□□ -1.98
YNL040WP53960 RPL27AYHR010W 411 nt2.71□□□□□ -1.98
YNL040WP53960 RNR2YJL026W 1200 nt2.71□□□□□ -1.98
YNL040WP53960 AIM25YJR100C 984 nt2.71□□□□□ -1.98
YNL040WP53960 ICS2YBR157C 768 nt2.71□□□□□ -1.98
YNL040WP53960 YBR292CYBR292C 372 nt2.71□□□□□ -1.98
YNL040WP53960 FRE2YKL220C 2136 nt2.71□□□□□ -1.98
YNL040WP53960 YCG1YDR325W 3108 nt2.71□□□□□ -1.98
YNL040WP53960 SOK1YDR006C 2706 nt2.7□□□□□ -1.98
YNL040WP53960 YNR066CYNR066C 1311 nt2.7□□□□□ -1.98
YNL040WP53960 IKI3YLR384C 4050 nt2.7□□□□□ -1.98
YNL040WP53960 GYL1YMR192W 2163 nt2.7□□□□□ -1.98
YNL040WP53960 YDL050CYDL050C 372 nt2.7□□□□□ -1.98
YNL040WP53960 SNU23YDL098C 585 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)G1tW(CCA)G1 72 nt2.7□□□□□ -1.98
YNL040WP53960 RGI2YIL057C 495 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)G2tW(CCA)G2 72 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)JtW(CCA)J 72 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)KtW(CCA)K 72 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)MtW(CCA)M 72 nt2.7□□□□□ -1.98
YNL040WP53960 tW(CCA)PtW(CCA)P 72 nt2.7□□□□□ -1.98
YNL040WP53960 YKL156C-AYKL156C-A 117 nt2.7□□□□□ -1.98
YNL040WP53960 BET5YML077W 480 nt2.7□□□□□ -1.98
YNL040WP53960 PML39YML107C 1005 nt2.7□□□□□ -1.98
YNL040WP53960 RCE1YMR274C 948 nt2.7□□□□□ -1.98
YNL040WP53960 CYR1YJL005W 6081 nt2.7□□□□□ -1.98
YNL040WP53960 RSN1YMR266W 2862 nt2.7□□□□□ -1.98
YNL040WP53960 MTL1YGR023W 1656 nt2.69□□□□□ -1.98
YNL040WP53960 KRE2YDR483W 1329 nt2.69□□□□□ -1.98
YNL040WP53960 SEC26YDR238C 2922 nt2.69□□□□□ -1.98
YNL040WP53960 MNT3YIL014W 1893 nt2.69□□□□□ -1.98
YNL040WP53960 PFS1YHR185C 714 nt2.69□□□□□ -1.98
YNL040WP53960 YLR347W-AYLR347W-A 141 nt2.69□□□□□ -1.98
YNL040WP53960 DUF1YOL087C 3351 nt2.69□□□□□ -1.98
YNL040WP53960 CHS3YBR023C 3498 nt2.69□□□□□ -1.98
YNL040WP53960 RPO41YFL036W 4056 nt2.68□□□□□ -1.98
YNL040WP53960 BUD26YDR241W 288 nt2.68□□□□□ -1.98
YNL040WP53960 THO1YER063W 657 nt2.68□□□□□ -1.98
YNL040WP53960 TDA10YGR205W 873 nt2.68□□□□□ -1.98
YNL040WP53960 YKL066WYKL066W 444 nt2.68□□□□□ -1.98
YNL040WP53960 SED5YLR026C 1023 nt2.68□□□□□ -1.98
YNL040WP53960 AAR2YBL074C 1068 nt2.68□□□□□ -1.98
YNL040WP53960 IRC13YOR235W 315 nt2.68□□□□□ -1.98
YNL040WP53960 YOR387CYOR387C 621 nt2.68□□□□□ -1.98
YNL040WP53960 TOM70YNL121C 1854 nt2.68□□□□□ -1.98
YNL040WP53960 RIX1YHR197W 2292 nt2.68□□□□□ -1.98
YNL040WP53960 SPP382YLR424W 2127 nt2.68□□□□□ -1.98
YNL040WP53960 HAA1YPR008W 2085 nt2.67□□□□□ -1.98
YNL040WP53960 MRPL32YCR003W 552 nt2.67□□□□□ -1.98
YNL040WP53960 snR78snR78 87 nt2.67□□□□□ -1.98
YNL040WP53960 TCA17YEL048C 459 nt2.67□□□□□ -1.98
YNL040WP53960 YGL177WYGL177W 348 nt2.67□□□□□ -1.98
YNL040WP53960 AIM23YJL131C 1071 nt2.67□□□□□ -1.98
YNL040WP53960 MIC27YNL100W 705 nt2.67□□□□□ -1.98
YNL040WP53960 YNL109WYNL109W 546 nt2.67□□□□□ -1.98
YNL040WP53960 RPL23AYBL087C 414 nt2.67□□□□□ -1.98
YNL040WP53960 RSM19YNR037C 276 nt2.67□□□□□ -1.98
YNL040WP53960 YDR034C-DYDR034C-D 5313 nt2.67□□□□□ -1.98
YNL040WP53960 MAK5YBR142W 2322 nt2.67□□□□□ -1.98
YNL040WP53960 MET5YJR137C 4329 nt2.66□□□□□ -1.98
YNL040WP53960 21S_rRNA21S_rRNA 3296 nt2.66□□□□□ -1.98
YNL040WP53960 EXO84YBR102C 2262 nt2.66□□□□□ -1.98
YNL040WP53960 GIN4YDR507C 3429 nt2.66□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms