Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
RPL28P46779 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL28P46779 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RPL28P46779 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RPL28P46779 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RPL28P46779 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL28P46779 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.81□□□□□ -0.2
RPL28P46779 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.81□□□□□ -0.2
RPL28P46779 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RPL28P46779 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.81□□□□□ -0.2
RPL28P46779 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL28P46779 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL28P46779 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RPL28P46779 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL28P46779 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
RPL28P46779 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RPL28P46779 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RPL28P46779 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.8□□□□□ -0.2
RPL28P46779 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
RPL28P46779 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL28P46779 MIR6724-1-201ENST00000616420 92 ntBASIC13.8□□□□□ -0.2
RPL28P46779 MIR6724-2-201ENST00000616483 92 ntBASIC13.8□□□□□ -0.2
RPL28P46779 MIR6724-4-201ENST00000617390 92 ntBASIC13.8□□□□□ -0.2
RPL28P46779 MIR6724-3-201ENST00000622482 92 ntBASIC13.8□□□□□ -0.2
RPL28P46779 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.8□□□□□ -0.2
RPL28P46779 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 AC087289.5-201ENST00000586076 3175 ntBASIC13.8□□□□□ -0.2
RPL28P46779 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RPL28P46779 FP325331.1-202ENST00000623531 1380 ntBASIC13.8□□□□□ -0.2
RPL28P46779 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.8□□□□□ -0.2
RPL28P46779 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RPL28P46779 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 C17orf82-201ENST00000623772 1530 ntBASIC13.79□□□□□ -0.2
RPL28P46779 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RPL28P46779 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RPL28P46779 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.79□□□□□ -0.2
RPL28P46779 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RPL28P46779 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RPL28P46779 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RPL28P46779 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.78□□□□□ -0.2
RPL28P46779 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RPL28P46779 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms