Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR2P43308 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR2P43308 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR2P43308 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR2P43308 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.05■□□□□ 0.8
SSR2P43308 EEF1DP3-203ENST00000566025 782 ntBASIC20.05■□□□□ 0.8
SSR2P43308 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SSR2P43308 AC053503.5-201ENST00000601508 636 ntBASIC20.05■□□□□ 0.8
SSR2P43308 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
SSR2P43308 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR2P43308 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSR2P43308 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR2P43308 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR2P43308 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.04■□□□□ 0.8
SSR2P43308 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SSR2P43308 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR2P43308 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR2P43308 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.03■□□□□ 0.8
SSR2P43308 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.03■□□□□ 0.8
SSR2P43308 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.03■□□□□ 0.8
SSR2P43308 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.03■□□□□ 0.8
SSR2P43308 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR2P43308 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SSR2P43308 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSR2P43308 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SSR2P43308 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SSR2P43308 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.02■□□□□ 0.8
SSR2P43308 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.02■□□□□ 0.8
SSR2P43308 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.02■□□□□ 0.8
SSR2P43308 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR2P43308 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSR2P43308 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.02■□□□□ 0.79
SSR2P43308 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR2P43308 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SSR2P43308 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.01■□□□□ 0.79
SSR2P43308 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.01■□□□□ 0.79
SSR2P43308 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR2P43308 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSR2P43308 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSR2P43308 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR2P43308 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.01■□□□□ 0.79
SSR2P43308 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20■□□□□ 0.79
SSR2P43308 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20■□□□□ 0.79
SSR2P43308 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20■□□□□ 0.79
SSR2P43308 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SSR2P43308 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SSR2P43308 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20■□□□□ 0.79
SSR2P43308 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20■□□□□ 0.79
SSR2P43308 FEM1AP4-201ENST00000443167 1987 ntBASIC20■□□□□ 0.79
SSR2P43308 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR2P43308 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 AL024507.2-201ENST00000606070 2574 ntBASIC19.99■□□□□ 0.79
SSR2P43308 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSR2P43308 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 AL137060.1-201ENST00000618151 2648 ntBASIC19.99■□□□□ 0.79
SSR2P43308 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.99■□□□□ 0.79
SSR2P43308 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.99■□□□□ 0.79
SSR2P43308 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 AC097381.1-201ENST00000429019 1296 ntBASIC19.99■□□□□ 0.79
SSR2P43308 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.99■□□□□ 0.79
SSR2P43308 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.99■□□□□ 0.79
SSR2P43308 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.99■□□□□ 0.79
SSR2P43308 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR2P43308 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms