Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 PSY2YNL201C 2577 nt2.17□□□□□ -2.06
CUP9P41817 MED1YPR070W 1701 nt2.17□□□□□ -2.06
CUP9P41817 snR57snR57 88 nt2.17□□□□□ -2.06
CUP9P41817 RRP42YDL111C 798 nt2.17□□□□□ -2.06
CUP9P41817 ARF1YDL192W 546 nt2.17□□□□□ -2.06
CUP9P41817 IZH1YDR492W 951 nt2.17□□□□□ -2.06
CUP9P41817 HYP2YEL034W 474 nt2.17□□□□□ -2.06
CUP9P41817 YER066C-AYER066C-A 501 nt2.17□□□□□ -2.06
CUP9P41817 VTC1YER072W 390 nt2.17□□□□□ -2.06
CUP9P41817 IRC6YFR043C 714 nt2.17□□□□□ -2.06
CUP9P41817 YGR039WYGR039W 312 nt2.17□□□□□ -2.06
CUP9P41817 YJR056CYJR056C 711 nt2.17□□□□□ -2.06
CUP9P41817 MPP6YNR024W 561 nt2.17□□□□□ -2.06
CUP9P41817 TOR1YJR066W 7413 nt2.17□□□□□ -2.06
CUP9P41817 SRP68YPL243W 1800 nt2.17□□□□□ -2.06
CUP9P41817 CWC22YGR278W 1734 nt2.17□□□□□ -2.06
CUP9P41817 YML096WYML096W 1578 nt2.16□□□□□ -2.06
CUP9P41817 MCM21YDR318W 1107 nt2.16□□□□□ -2.06
CUP9P41817 TAN1YGL232W 870 nt2.16□□□□□ -2.06
CUP9P41817 RPL17BYJL177W 555 nt2.16□□□□□ -2.06
CUP9P41817 YLR365WYLR365W 333 nt2.16□□□□□ -2.06
CUP9P41817 YBL028CYBL028C 321 nt2.16□□□□□ -2.06
CUP9P41817 YBL081WYBL081W 1107 nt2.16□□□□□ -2.06
CUP9P41817 YNR062CYNR062C 984 nt2.16□□□□□ -2.06
CUP9P41817 MPD2YOL088C 834 nt2.16□□□□□ -2.06
CUP9P41817 MRD1YPR112C 2664 nt2.16□□□□□ -2.06
CUP9P41817 UTP14YML093W 2700 nt2.15□□□□□ -2.06
CUP9P41817 ARP8YOR141C 2646 nt2.15□□□□□ -2.06
CUP9P41817 CTH1YDR151C 978 nt2.15□□□□□ -2.07
CUP9P41817 LRS4YDR439W 1044 nt2.15□□□□□ -2.07
CUP9P41817 AAD16YFL057C 459 nt2.15□□□□□ -2.07
CUP9P41817 YGR073CYGR073C 372 nt2.15□□□□□ -2.07
CUP9P41817 YHR097CYHR097C 1101 nt2.15□□□□□ -2.07
CUP9P41817 YLR076CYLR076C 423 nt2.15□□□□□ -2.07
CUP9P41817 GLO1YML004C 981 nt2.15□□□□□ -2.07
CUP9P41817 YMR194C-AYMR194C-A 225 nt2.15□□□□□ -2.07
CUP9P41817 INP1YMR204C 1263 nt2.15□□□□□ -2.07
CUP9P41817 UBP15YMR304W 3693 nt2.15□□□□□ -2.07
CUP9P41817 ESL2YKR096W 3588 nt2.15□□□□□ -2.07
CUP9P41817 PAF1YBR279W 1338 nt2.15□□□□□ -2.07
CUP9P41817 DSE4YNR067C 3354 nt2.15□□□□□ -2.07
CUP9P41817 GYL1YMR192W 2163 nt2.15□□□□□ -2.07
CUP9P41817 ECM18YDR125C 1362 nt2.14□□□□□ -2.07
CUP9P41817 BNI4YNL233W 2679 nt2.14□□□□□ -2.07
CUP9P41817 YDL050CYDL050C 372 nt2.14□□□□□ -2.07
CUP9P41817 CIR1YGR207C 786 nt2.14□□□□□ -2.07
CUP9P41817 YLR290CYLR290C 834 nt2.14□□□□□ -2.07
CUP9P41817 MIC27YNL100W 705 nt2.14□□□□□ -2.07
CUP9P41817 YNL203CYNL203C 612 nt2.14□□□□□ -2.07
CUP9P41817 INO4YOL108C 456 nt2.14□□□□□ -2.07
CUP9P41817 ACM1YPL267W 630 nt2.14□□□□□ -2.07
CUP9P41817 APD1YBR151W 951 nt2.14□□□□□ -2.07
CUP9P41817 MSB1YOR188W 3414 nt2.14□□□□□ -2.07
CUP9P41817 TAF2YCR042C 4224 nt2.14□□□□□ -2.07
CUP9P41817 UBP1YDL122W 2430 nt2.13□□□□□ -2.07
CUP9P41817 DUN1YDL101C 1542 nt2.13□□□□□ -2.07
CUP9P41817 YCR064CYCR064C 411 nt2.13□□□□□ -2.07
CUP9P41817 YGL101WYGL101W 648 nt2.13□□□□□ -2.07
CUP9P41817 YIL156W-AYIL156W-A 402 nt2.13□□□□□ -2.07
CUP9P41817 DID4YKL002W 699 nt2.13□□□□□ -2.07
CUP9P41817 YKR070WYKR070W 1059 nt2.13□□□□□ -2.07
CUP9P41817 RDN58-1RDN58-1 158 nt2.13□□□□□ -2.07
CUP9P41817 RDN58-2RDN58-2 158 nt2.13□□□□□ -2.07
CUP9P41817 PSD2YGR170W 3417 nt2.13□□□□□ -2.07
CUP9P41817 SCD5YOR329C 2619 nt2.13□□□□□ -2.07
CUP9P41817 SGM1YJR134C 2124 nt2.12□□□□□ -2.07
CUP9P41817 STH1YIL126W 4080 nt2.12□□□□□ -2.07
CUP9P41817 GCD10YNL062C 1437 nt2.12□□□□□ -2.07
CUP9P41817 snR63snR63 255 nt2.12□□□□□ -2.07
CUP9P41817 NSE3YDR288W 912 nt2.12□□□□□ -2.07
CUP9P41817 MRPL38YKL170W 417 nt2.12□□□□□ -2.07
CUP9P41817 MRPL33YMR286W 261 nt2.12□□□□□ -2.07
CUP9P41817 RPS10AYOR293W 318 nt2.12□□□□□ -2.07
CUP9P41817 HFM1YGL251C 3564 nt2.12□□□□□ -2.07
CUP9P41817 GEA1YJR031C 4227 nt2.12□□□□□ -2.07
CUP9P41817 RED1YLR263W 2484 nt2.12□□□□□ -2.07
CUP9P41817 YDR034C-DYDR034C-D 5313 nt2.12□□□□□ -2.07
CUP9P41817 YDR210W-BYDR210W-B 5313 nt2.12□□□□□ -2.07
CUP9P41817 YLR410W-BYLR410W-B 5313 nt2.12□□□□□ -2.07
CUP9P41817 SWR1YDR334W 4545 nt2.12□□□□□ -2.07
CUP9P41817 CSF1YLR087C 8877 nt2.11□□□□□ -2.07
CUP9P41817 RGR1YLR071C 3249 nt2.11□□□□□ -2.07
CUP9P41817 YGR293CYGR293C 462 nt2.11□□□□□ -2.07
CUP9P41817 DCG1YIR030C 735 nt2.11□□□□□ -2.07
CUP9P41817 SIC1YLR079W 855 nt2.11□□□□□ -2.07
CUP9P41817 VHR2YER064C 1518 nt2.11□□□□□ -2.07
CUP9P41817 TRA1YHR099W 11235 nt2.1□□□□□ -2.07
CUP9P41817 YEL075CYEL075C 369 nt2.1□□□□□ -2.07
CUP9P41817 YGR064WYGR064W 369 nt2.1□□□□□ -2.07
CUP9P41817 YGR190CYGR190C 366 nt2.1□□□□□ -2.07
CUP9P41817 YIL102C-AYIL102C-A 228 nt2.1□□□□□ -2.07
CUP9P41817 HRT3YLR097C 1035 nt2.1□□□□□ -2.07
CUP9P41817 YBL096CYBL096C 309 nt2.1□□□□□ -2.07
CUP9P41817 IAH1YOR126C 717 nt2.1□□□□□ -2.07
CUP9P41817 MUS81YDR386W 1899 nt2.09□□□□□ -2.07
CUP9P41817 SMC6YLR383W 3345 nt2.09□□□□□ -2.07
CUP9P41817 RIM13YMR154C 2184 nt2.09□□□□□ -2.07
CUP9P41817 BNI1YNL271C 5862 nt2.09□□□□□ -2.07
CUP9P41817 YKL100CYKL100C 1764 nt2.09□□□□□ -2.07
CUP9P41817 SMX2YFL017W-A 234 nt2.09□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 33.8 ms