Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 SAG1YJR004C 1953 nt3.38□□□□□ -1.87
NDE1P40215 MSH4YFL003C 2637 nt3.38□□□□□ -1.87
NDE1P40215 VEL1YGL258W 621 nt3.38□□□□□ -1.87
NDE1P40215 COX6YHR051W 447 nt3.38□□□□□ -1.87
NDE1P40215 YAL031W-AYAL031W-A 309 nt3.38□□□□□ -1.87
NDE1P40215 YPL142CYPL142C 318 nt3.38□□□□□ -1.87
NDE1P40215 NGG1YDR176W 2109 nt3.37□□□□□ -1.87
NDE1P40215 DAN4YJR151C 3486 nt3.37□□□□□ -1.87
NDE1P40215 EMI1YDR512C 564 nt3.37□□□□□ -1.87
NDE1P40215 NSA2YER126C 786 nt3.37□□□□□ -1.87
NDE1P40215 YHL048C-AYHL048C-A 135 nt3.37□□□□□ -1.87
NDE1P40215 AGE2YIL044C 897 nt3.37□□□□□ -1.87
NDE1P40215 YIL141WYIL141W 390 nt3.37□□□□□ -1.87
NDE1P40215 ANB1YJR047C 474 nt3.37□□□□□ -1.87
NDE1P40215 AIM26YKL037W 357 nt3.37□□□□□ -1.87
NDE1P40215 MRPL38YKL170W 417 nt3.37□□□□□ -1.87
NDE1P40215 SPC2YML055W 537 nt3.37□□□□□ -1.87
NDE1P40215 RIM11YMR139W 1113 nt3.37□□□□□ -1.87
NDE1P40215 MPD2YOL088C 834 nt3.37□□□□□ -1.87
NDE1P40215 TIM12YBR091C 330 nt3.37□□□□□ -1.87
NDE1P40215 MDN1YLR106C 14733 nt3.37□□□□□ -1.87
NDE1P40215 HOP1YIL072W 1818 nt3.37□□□□□ -1.87
NDE1P40215 YGL176CYGL176C 1665 nt3.36□□□□□ -1.87
NDE1P40215 SOK1YDR006C 2706 nt3.36□□□□□ -1.87
NDE1P40215 YAT2YER024W 2772 nt3.36□□□□□ -1.87
NDE1P40215 FLO9YAL063C 3969 nt3.36□□□□□ -1.87
NDE1P40215 tV(CAC)DtV(CAC)D 73 nt3.36□□□□□ -1.87
NDE1P40215 tV(CAC)HtV(CAC)H 73 nt3.36□□□□□ -1.87
NDE1P40215 PIR1YKL164C 1026 nt3.36□□□□□ -1.87
NDE1P40215 SRL3YKR091W 741 nt3.36□□□□□ -1.87
NDE1P40215 TIR2YOR010C 756 nt3.36□□□□□ -1.87
NDE1P40215 CMD1YBR109C 444 nt3.36□□□□□ -1.87
NDE1P40215 UTP5YDR398W 1932 nt3.36□□□□□ -1.87
NDE1P40215 DSE4YNR067C 3354 nt3.35□□□□□ -1.87
NDE1P40215 YAK1YJL141C 2424 nt3.35□□□□□ -1.87
NDE1P40215 VHR2YER064C 1518 nt3.35□□□□□ -1.87
NDE1P40215 YGL039WYGL039W 1047 nt3.35□□□□□ -1.87
NDE1P40215 MTC3YGL226W 372 nt3.35□□□□□ -1.87
NDE1P40215 DSE2YHR143W 978 nt3.35□□□□□ -1.87
NDE1P40215 YHR214C-EYHR214C-E 300 nt3.35□□□□□ -1.87
NDE1P40215 ATG10YLL042C 504 nt3.35□□□□□ -1.87
NDE1P40215 YAR070CYAR070C 300 nt3.35□□□□□ -1.87
NDE1P40215 VMA6YLR447C 1038 nt3.35□□□□□ -1.87
NDE1P40215 YNL203CYNL203C 612 nt3.35□□□□□ -1.87
NDE1P40215 RTT109YLL002W 1311 nt3.35□□□□□ -1.87
NDE1P40215 TSC11YER093C 4293 nt3.35□□□□□ -1.87
NDE1P40215 STN1YDR082W 1485 nt3.35□□□□□ -1.87
NDE1P40215 YGL159WYGL159W 1113 nt3.34□□□□□ -1.87
NDE1P40215 GOS1YHL031C 672 nt3.34□□□□□ -1.87
NDE1P40215 IPP1YBR011C 864 nt3.34□□□□□ -1.87
NDE1P40215 SFG1YOR315W 1041 nt3.34□□□□□ -1.87
NDE1P40215 STE23YLR389C 3084 nt3.34□□□□□ -1.88
NDE1P40215 YGR027W-BYGR027W-B 5268 nt3.33□□□□□ -1.88
NDE1P40215 YLR227W-BYLR227W-B 5268 nt3.33□□□□□ -1.88
NDE1P40215 YPR158C-DYPR158C-D 5268 nt3.33□□□□□ -1.88
NDE1P40215 CBP2YHL038C 1893 nt3.33□□□□□ -1.88
NDE1P40215 ATP16YDL004W 483 nt3.33□□□□□ -1.88
NDE1P40215 RPA14YDR156W 414 nt3.33□□□□□ -1.88
NDE1P40215 RPS8BYER102W 603 nt3.33□□□□□ -1.88
NDE1P40215 DAD2YKR083C 402 nt3.33□□□□□ -1.88
NDE1P40215 YNL089CYNL089C 477 nt3.33□□□□□ -1.88
NDE1P40215 RPS8AYBL072C 603 nt3.33□□□□□ -1.88
NDE1P40215 YNL320WYNL320W 855 nt3.33□□□□□ -1.88
NDE1P40215 DIM1YPL266W 957 nt3.33□□□□□ -1.88
NDE1P40215 YBR090CYBR090C 369 nt3.33□□□□□ -1.88
NDE1P40215 AIM4YBR194W 372 nt3.33□□□□□ -1.88
NDE1P40215 ARP5YNL059C 2268 nt3.33□□□□□ -1.88
NDE1P40215 AVT2YEL064C 1443 nt3.33□□□□□ -1.88
NDE1P40215 TAF1YGR274C 3201 nt3.32□□□□□ -1.88
NDE1P40215 YCR100CYCR100C 951 nt3.32□□□□□ -1.88
NDE1P40215 VAB2YEL005C 849 nt3.32□□□□□ -1.88
NDE1P40215 YFL015CYFL015C 495 nt3.32□□□□□ -1.88
NDE1P40215 YHL002C-AYHL002C-A 489 nt3.32□□□□□ -1.88
NDE1P40215 YJL047C-AYJL047C-A 135 nt3.32□□□□□ -1.88
NDE1P40215 ECM4YKR076W 1113 nt3.32□□□□□ -1.88
NDE1P40215 GIM5YML094W 492 nt3.32□□□□□ -1.88
NDE1P40215 SHH3YMR118C 591 nt3.32□□□□□ -1.88
NDE1P40215 YNL043CYNL043C 321 nt3.32□□□□□ -1.88
NDE1P40215 PET20YPL159C 762 nt3.32□□□□□ -1.88
NDE1P40215 YPR027CYPR027C 834 nt3.32□□□□□ -1.88
NDE1P40215 HFD1YMR110C 1599 nt3.31□□□□□ -1.88
NDE1P40215 YFR054CYFR054C 579 nt3.31□□□□□ -1.88
NDE1P40215 SEC28YIL076W 891 nt3.31□□□□□ -1.88
NDE1P40215 YLR050CYLR050C 486 nt3.31□□□□□ -1.88
NDE1P40215 YLR307C-AYLR307C-A 264 nt3.31□□□□□ -1.88
NDE1P40215 YLR366WYLR366W 306 nt3.31□□□□□ -1.88
NDE1P40215 ADI1YMR009W 540 nt3.31□□□□□ -1.88
NDE1P40215 RPL16BYNL069C 597 nt3.31□□□□□ -1.88
NDE1P40215 YPR108W-AYPR108W-A 213 nt3.31□□□□□ -1.88
NDE1P40215 VPS33YLR396C 2076 nt3.31□□□□□ -1.88
NDE1P40215 IKI3YLR384C 4050 nt3.3□□□□□ -1.88
NDE1P40215 VPS30YPL120W 1674 nt3.3□□□□□ -1.88
NDE1P40215 AI2Q0055 2565 nt3.3□□□□□ -1.88
NDE1P40215 GIS4YML006C 2325 nt3.3□□□□□ -1.88
NDE1P40215 SRD1YCR018C 666 nt3.3□□□□□ -1.88
NDE1P40215 RSM24YDR175C 960 nt3.3□□□□□ -1.88
NDE1P40215 YER039C-AYER039C-A 219 nt3.3□□□□□ -1.88
NDE1P40215 NDL1YLR254C 570 nt3.3□□□□□ -1.88
NDE1P40215 YSF3YNL138W-A 258 nt3.3□□□□□ -1.88
NDE1P40215 RPC40YPR110C 1008 nt3.3□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 115.5 ms