Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CD40P25942 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CD40P25942 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CD40P25942 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CD40P25942 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CD40P25942 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.16■□□□□ 0.5
CD40P25942 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.16■□□□□ 0.5
CD40P25942 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.16■□□□□ 0.5
CD40P25942 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.16■□□□□ 0.5
CD40P25942 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CD40P25942 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.16■□□□□ 0.5
CD40P25942 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.16■□□□□ 0.5
CD40P25942 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CD40P25942 AC068338.2-201ENST00000563278 1430 ntBASIC18.15■□□□□ 0.5
CD40P25942 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.15■□□□□ 0.5
CD40P25942 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CD40P25942 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.15■□□□□ 0.5
CD40P25942 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.15■□□□□ 0.5
CD40P25942 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CD40P25942 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CD40P25942 RBM17P2-201ENST00000616397 1405 ntBASIC18.15■□□□□ 0.5
CD40P25942 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CD40P25942 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
CD40P25942 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CD40P25942 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.14■□□□□ 0.49
CD40P25942 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
CD40P25942 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 AL355802.2-201ENST00000402069 882 ntBASIC18.14■□□□□ 0.49
CD40P25942 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.14■□□□□ 0.49
CD40P25942 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.14■□□□□ 0.49
CD40P25942 AF201337.1-201ENST00000520239 748 ntBASIC18.14■□□□□ 0.49
CD40P25942 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.14■□□□□ 0.49
CD40P25942 AC133552.2-202ENST00000575694 574 ntBASIC18.14■□□□□ 0.49
CD40P25942 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 ECEL1P1-201ENST00000373592 1742 ntBASIC18.14■□□□□ 0.49
CD40P25942 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CD40P25942 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD40P25942 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CD40P25942 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.13■□□□□ 0.49
CD40P25942 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CD40P25942 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD40P25942 CYP2T1P-201ENST00000432607 1285 ntBASIC18.13■□□□□ 0.49
CD40P25942 TSPY6P-201ENST00000448518 926 ntBASIC18.13■□□□□ 0.49
CD40P25942 AC243732.1-201ENST00000612648 864 ntBASIC18.13■□□□□ 0.49
CD40P25942 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD40P25942 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.13■□□□□ 0.49
CD40P25942 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CD40P25942 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.12■□□□□ 0.49
CD40P25942 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 AC105036.2-201ENST00000569468 176 ntBASIC18.12■□□□□ 0.49
CD40P25942 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.12■□□□□ 0.49
CD40P25942 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CD40P25942 C11orf96-202ENST00000528572 1834 ntBASIC18.12■□□□□ 0.49
CD40P25942 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.12■□□□□ 0.49
CD40P25942 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.11■□□□□ 0.49
CD40P25942 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms