Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 IZH2YOL002C 954 nt3.71□□□□□ -1.82
MSH1P25846 LTP1YPR073C 486 nt3.71□□□□□ -1.82
MSH1P25846 LOA1YPR139C 903 nt3.71□□□□□ -1.82
MSH1P25846 CDC40YDR364C 1368 nt3.71□□□□□ -1.82
MSH1P25846 VPS17YOR132W 1656 nt3.71□□□□□ -1.82
MSH1P25846 TDA1YMR291W 1761 nt3.71□□□□□ -1.82
MSH1P25846 YNL011CYNL011C 1335 nt3.7□□□□□ -1.82
MSH1P25846 YMR018WYMR018W 1545 nt3.7□□□□□ -1.82
MSH1P25846 SRP68YPL243W 1800 nt3.7□□□□□ -1.82
MSH1P25846 MND1YGL183C 660 nt3.7□□□□□ -1.82
MSH1P25846 YGR073CYGR073C 372 nt3.7□□□□□ -1.82
MSH1P25846 SGN1YIR001C 753 nt3.7□□□□□ -1.82
MSH1P25846 YKL156C-AYKL156C-A 117 nt3.7□□□□□ -1.82
MSH1P25846 PRM6YML047C 1059 nt3.7□□□□□ -1.82
MSH1P25846 YNL013CYNL013C 378 nt3.7□□□□□ -1.82
MSH1P25846 CMD1YBR109C 444 nt3.7□□□□□ -1.82
MSH1P25846 ADF1YCL058W-A 342 nt3.7□□□□□ -1.82
MSH1P25846 VTC4YJL012C 2166 nt3.7□□□□□ -1.82
MSH1P25846 FUS2YMR232W 2034 nt3.7□□□□□ -1.82
MSH1P25846 CHS3YBR023C 3498 nt3.69□□□□□ -1.82
MSH1P25846 SYO1YDL063C 1863 nt3.69□□□□□ -1.82
MSH1P25846 AAD3YCR107W 1092 nt3.69□□□□□ -1.82
MSH1P25846 USE1YGL098W 738 nt3.69□□□□□ -1.82
MSH1P25846 YGR039WYGR039W 312 nt3.69□□□□□ -1.82
MSH1P25846 LSM1YJL124C 519 nt3.69□□□□□ -1.82
MSH1P25846 SDS22YKL193C 1017 nt3.69□□□□□ -1.82
MSH1P25846 ATG38YLR211C 681 nt3.69□□□□□ -1.82
MSH1P25846 OCA2YNL056W 594 nt3.69□□□□□ -1.82
MSH1P25846 GIM3YNL153C 390 nt3.69□□□□□ -1.82
MSH1P25846 YPL119C-AYPL119C-A 264 nt3.69□□□□□ -1.82
MSH1P25846 MUD1YBR119W 897 nt3.69□□□□□ -1.82
MSH1P25846 TGL3YMR313C 1929 nt3.69□□□□□ -1.82
MSH1P25846 YMR317WYMR317W 3423 nt3.69□□□□□ -1.82
MSH1P25846 GSC2YGR032W 5688 nt3.69□□□□□ -1.82
MSH1P25846 NDC80YIL144W 2076 nt3.69□□□□□ -1.82
MSH1P25846 UBP8YMR223W 1416 nt3.69□□□□□ -1.82
MSH1P25846 ERG9YHR190W 1335 nt3.69□□□□□ -1.82
MSH1P25846 RAD4YER162C 2265 nt3.68□□□□□ -1.82
MSH1P25846 KEI1YDR367W 666 nt3.68□□□□□ -1.82
MSH1P25846 YER039C-AYER039C-A 219 nt3.68□□□□□ -1.82
MSH1P25846 YGL082WYGL082W 1146 nt3.68□□□□□ -1.82
MSH1P25846 RHO5YNL180C 996 nt3.68□□□□□ -1.82
MSH1P25846 SGT1YOR057W 1188 nt3.68□□□□□ -1.82
MSH1P25846 YPR147CYPR147C 915 nt3.68□□□□□ -1.82
MSH1P25846 TAO3YIL129C 7131 nt3.68□□□□□ -1.82
MSH1P25846 RPA14YDR156W 414 nt3.67□□□□□ -1.82
MSH1P25846 YIP5YGL161C 933 nt3.67□□□□□ -1.82
MSH1P25846 PEX18YHR160C 852 nt3.67□□□□□ -1.82
MSH1P25846 YHR212CYHR212C 336 nt3.67□□□□□ -1.82
MSH1P25846 YKL069WYKL069W 543 nt3.67□□□□□ -1.82
MSH1P25846 VMA5YKL080W 1179 nt3.67□□□□□ -1.82
MSH1P25846 YAR060CYAR060C 336 nt3.67□□□□□ -1.82
MSH1P25846 GCY1YOR120W 939 nt3.67□□□□□ -1.82
MSH1P25846 POL4YCR014C 1749 nt3.67□□□□□ -1.82
MSH1P25846 BYE1YKL005C 1785 nt3.66□□□□□ -1.82
MSH1P25846 YDL071CYDL071C 375 nt3.66□□□□□ -1.82
MSH1P25846 SUP56tL(CAA)A 82 nt3.66□□□□□ -1.82
MSH1P25846 SUP53tL(CAA)C 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)DtL(CAA)D 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)G1tL(CAA)G1 82 nt3.66□□□□□ -1.82
MSH1P25846 SUP54tL(CAA)G2 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)G3tL(CAA)G3 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)KtL(CAA)K 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)LtL(CAA)L 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)MtL(CAA)M 82 nt3.66□□□□□ -1.82
MSH1P25846 tL(CAA)NtL(CAA)N 82 nt3.66□□□□□ -1.82
MSH1P25846 YGL039WYGL039W 1047 nt3.66□□□□□ -1.82
MSH1P25846 PRP38YGR075C 729 nt3.66□□□□□ -1.82
MSH1P25846 RPN1YHR027C 2982 nt3.66□□□□□ -1.82
MSH1P25846 VMA10YHR039C-A 345 nt3.66□□□□□ -1.82
MSH1P25846 HUT1YPL244C 1020 nt3.66□□□□□ -1.82
MSH1P25846 YPR053CYPR053C 456 nt3.66□□□□□ -1.82
MSH1P25846 snR35snR35 204 nt3.66□□□□□ -1.82
MSH1P25846 CIN1YOR349W 3045 nt3.66□□□□□ -1.82
MSH1P25846 SHE9YDR393W 1371 nt3.65□□□□□ -1.82
MSH1P25846 ANR2YKL047W 1551 nt3.65□□□□□ -1.82
MSH1P25846 SNO3YFL060C 669 nt3.65□□□□□ -1.83
MSH1P25846 MST27YGL051W 705 nt3.65□□□□□ -1.83
MSH1P25846 YGR126WYGR126W 693 nt3.65□□□□□ -1.83
MSH1P25846 YGR161W-CYGR161W-C 279 nt3.65□□□□□ -1.83
MSH1P25846 QCR10YHR001W-A 234 nt3.65□□□□□ -1.83
MSH1P25846 PRP21YJL203W 843 nt3.65□□□□□ -1.83
MSH1P25846 COX19YLL018C-A 297 nt3.65□□□□□ -1.83
MSH1P25846 MST28YAR033W 705 nt3.65□□□□□ -1.83
MSH1P25846 SNO2YNL334C 669 nt3.65□□□□□ -1.83
MSH1P25846 YPS6YIR039C 1614 nt3.65□□□□□ -1.83
MSH1P25846 RAD5YLR032W 3510 nt3.65□□□□□ -1.83
MSH1P25846 YGR237CYGR237C 2358 nt3.65□□□□□ -1.83
MSH1P25846 ETP1YHL010C 1758 nt3.64□□□□□ -1.83
MSH1P25846 SRD1YCR018C 666 nt3.64□□□□□ -1.83
MSH1P25846 THO1YER063W 657 nt3.64□□□□□ -1.83
MSH1P25846 SMX2YFL017W-A 234 nt3.64□□□□□ -1.83
MSH1P25846 PET54YGR222W 882 nt3.64□□□□□ -1.83
MSH1P25846 YNL184CYNL184C 327 nt3.64□□□□□ -1.83
MSH1P25846 MIX23YBL107C 591 nt3.64□□□□□ -1.83
MSH1P25846 PEX11YOL147C 711 nt3.64□□□□□ -1.83
MSH1P25846 ARP4YJL081C 1470 nt3.64□□□□□ -1.83
MSH1P25846 SLF1YDR515W 1344 nt3.64□□□□□ -1.83
MSH1P25846 STU2YLR045C 2667 nt3.64□□□□□ -1.83
MSH1P25846 SPT10YJL127C 1923 nt3.64□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 37 ms