Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeast

Known RBP Predictions only

Length 199 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	P17536	DPB3	YBR278W	606 nt		3.21	□□□□□ -1.9
TPM1	P17536	PSY2	YNL201C	2577 nt		3.2	□□□□□ -1.9
TPM1	P17536	MIX14	YDR031W	366 nt		3.2	□□□□□ -1.9
TPM1	P17536	RPB9	YGL070C	369 nt		3.2	□□□□□ -1.9
TPM1	P17536	YGR160W	YGR160W	612 nt		3.2	□□□□□ -1.9
TPM1	P17536	YIL102C-A	YIL102C-A	228 nt		3.2	□□□□□ -1.9
TPM1	P17536	DAD2	YKR083C	402 nt		3.2	□□□□□ -1.9
TPM1	P17536	IZH4	YOL101C	939 nt		3.2	□□□□□ -1.9
TPM1	P17536	YPR027C	YPR027C	834 nt		3.2	□□□□□ -1.9
TPM1	P17536	DSE4	YNR067C	3354 nt		3.2	□□□□□ -1.9
TPM1	P17536	SRP68	YPL243W	1800 nt		3.2	□□□□□ -1.9
TPM1	P17536	AVT5	YBL089W	1380 nt		3.2	□□□□□ -1.9
TPM1	P17536	SEC7	YDR170C	6030 nt		3.2	□□□□□ -1.9
TPM1	P17536	YGR067C	YGR067C	2415 nt		3.19	□□□□□ -1.9
TPM1	P17536	HMO1	YDR174W	741 nt		3.19	□□□□□ -1.9
TPM1	P17536	VMA8	YEL051W	771 nt		3.19	□□□□□ -1.9
TPM1	P17536	RPA12	YJR063W	378 nt		3.19	□□□□□ -1.9
TPM1	P17536	YNL234W	YNL234W	1281 nt		3.19	□□□□□ -1.9
TPM1	P17536	YOL114C	YOL114C	609 nt		3.19	□□□□□ -1.9
TPM1	P17536	IRC14	YOR135C	342 nt		3.19	□□□□□ -1.9
TPM1	P17536	RPO41	YFL036W	4056 nt		3.19	□□□□□ -1.9
TPM1	P17536	snR68	snR68	136 nt		3.18	□□□□□ -1.9
TPM1	P17536	PRP18	YGR006W	756 nt		3.18	□□□□□ -1.9
TPM1	P17536	MRPL9	YGR220C	810 nt		3.18	□□□□□ -1.9
TPM1	P17536	YIL174W	YIL174W	228 nt		3.18	□□□□□ -1.9
TPM1	P17536	YJL222W-A	YJL222W-A	228 nt		3.18	□□□□□ -1.9
TPM1	P17536	MRPL38	YKL170W	417 nt		3.18	□□□□□ -1.9
TPM1	P17536	YLR339C	YLR339C	552 nt		3.18	□□□□□ -1.9
TPM1	P17536	BUD21	YOR078W	645 nt		3.18	□□□□□ -1.9
TPM1	P17536	VHR2	YER064C	1518 nt		3.18	□□□□□ -1.9
TPM1	P17536	FRE8	YLR047C	2061 nt		3.18	□□□□□ -1.9
TPM1	P17536	ROM1	YGR070W	3468 nt		3.17	□□□□□ -1.9
TPM1	P17536	YDR535C	YDR535C	501 nt		3.17	□□□□□ -1.9
TPM1	P17536	PEX14	YGL153W	1026 nt		3.17	□□□□□ -1.9
TPM1	P17536	TDA10	YGR205W	873 nt		3.17	□□□□□ -1.9
TPM1	P17536	VMA6	YLR447C	1038 nt		3.17	□□□□□ -1.9
TPM1	P17536	SUB1	YMR039C	879 nt		3.17	□□□□□ -1.9
TPM1	P17536	YNL171C	YNL171C	369 nt		3.17	□□□□□ -1.9
TPM1	P17536	YOR331C	YOR331C	558 nt		3.17	□□□□□ -1.9
TPM1	P17536	INP52	YNL106C	3552 nt		3.16	□□□□□ -1.9
TPM1	P17536	KAP104	YBR017C	2757 nt		3.16	□□□□□ -1.9
TPM1	P17536	YGR017W	YGR017W	894 nt		3.16	□□□□□ -1.9
TPM1	P17536	GPI14	YJR013W	1212 nt		3.16	□□□□□ -1.9
TPM1	P17536	SAW1	YAL027W	786 nt		3.16	□□□□□ -1.9
TPM1	P17536	PSY3	YLR376C	729 nt		3.16	□□□□□ -1.9
TPM1	P17536	LTP1	YPR073C	486 nt		3.16	□□□□□ -1.9
TPM1	P17536	VPS64	YDR200C	1815 nt		3.16	□□□□□ -1.9
TPM1	P17536	MSH4	YFL003C	2637 nt		3.16	□□□□□ -1.9
TPM1	P17536	CAF120	YNL278W	3183 nt		3.16	□□□□□ -1.9
TPM1	P17536	YPL150W	YPL150W	2706 nt		3.15	□□□□□ -1.9
TPM1	P17536	RSE1	YML049C	4086 nt		3.15	□□□□□ -1.91
TPM1	P17536	ERP3	YDL018C	678 nt		3.15	□□□□□ -1.91
TPM1	P17536	SNU23	YDL098C	585 nt		3.15	□□□□□ -1.91
TPM1	P17536	AI3	Q0060	1248 nt		3.15	□□□□□ -1.91
TPM1	P17536	PET100	YDR079W	336 nt		3.15	□□□□□ -1.91
TPM1	P17536	TDA8	YAL064C-A	381 nt		3.15	□□□□□ -1.91
TPM1	P17536	YLR230W	YLR230W	306 nt		3.15	□□□□□ -1.91
TPM1	P17536	YMR099C	YMR099C	894 nt		3.15	□□□□□ -1.91
TPM1	P17536	MPD2	YOL088C	834 nt		3.15	□□□□□ -1.91
TPM1	P17536	GRX7	YBR014C	612 nt		3.15	□□□□□ -1.91
TPM1	P17536	CTP1	YBR291C	900 nt		3.15	□□□□□ -1.91
TPM1	P17536	TAF2	YCR042C	4224 nt		3.15	□□□□□ -1.91
TPM1	P17536	SEC26	YDR238C	2922 nt		3.15	□□□□□ -1.91
TPM1	P17536	KAR5	YMR065W	1515 nt		3.14	□□□□□ -1.91
TPM1	P17536	POL4	YCR014C	1749 nt		3.14	□□□□□ -1.91
TPM1	P17536	PNC1	YGL037C	651 nt		3.14	□□□□□ -1.91
TPM1	P17536	YGL159W	YGL159W	1113 nt		3.14	□□□□□ -1.91
TPM1	P17536	TCD1	YHR003C	1290 nt		3.14	□□□□□ -1.91
TPM1	P17536	YHR182C-A	YHR182C-A	474 nt		3.14	□□□□□ -1.91
TPM1	P17536	INP1	YMR204C	1263 nt		3.14	□□□□□ -1.91
TPM1	P17536	YNL043C	YNL043C	321 nt		3.14	□□□□□ -1.91
TPM1	P17536	YSF3	YNL138W-A	258 nt		3.14	□□□□□ -1.91
TPM1	P17536	YOR387C	YOR387C	621 nt		3.14	□□□□□ -1.91
TPM1	P17536	PBP2	YBR233W	1242 nt		3.14	□□□□□ -1.91
TPM1	P17536	RGR1	YLR071C	3249 nt		3.14	□□□□□ -1.91
TPM1	P17536	KRE2	YDR483W	1329 nt		3.14	□□□□□ -1.91
TPM1	P17536	CDC20	YGL116W	1833 nt		3.14	□□□□□ -1.91
TPM1	P17536	YCR045W-A	YCR045W-A	351 nt		3.13	□□□□□ -1.91
TPM1	P17536	DYN2	YDR424C	279 nt		3.13	□□□□□ -1.91
TPM1	P17536	COB	Q0105	1158 nt		3.13	□□□□□ -1.91
TPM1	P17536	YAL034C-B	YAL034C-B	354 nt		3.13	□□□□□ -1.91
TPM1	P17536	OMA1	YKR087C	1038 nt		3.13	□□□□□ -1.91
TPM1	P17536	ERV41	YML067C	1059 nt		3.13	□□□□□ -1.91
TPM1	P17536	ECM13	YBL043W	774 nt		3.13	□□□□□ -1.91
TPM1	P17536	RPL20A	YMR242C	519 nt		3.13	□□□□□ -1.91
TPM1	P17536	RRI1	YDL216C	1323 nt		3.13	□□□□□ -1.91
TPM1	P17536	DNA2	YHR164C	4569 nt		3.13	□□□□□ -1.91
TPM1	P17536	SLY41	YOR307C	1362 nt		3.12	□□□□□ -1.91
TPM1	P17536	SLP1	YOR154W	1764 nt		3.12	□□□□□ -1.91
TPM1	P17536	ESL2	YKR096W	3588 nt		3.12	□□□□□ -1.91
TPM1	P17536	HPA3	YEL066W	540 nt		3.12	□□□□□ -1.91
TPM1	P17536	PFS1	YHR185C	714 nt		3.12	□□□□□ -1.91
TPM1	P17536	RPS22A	YJL190C	393 nt		3.12	□□□□□ -1.91
TPM1	P17536	YJR071W	YJR071W	369 nt		3.12	□□□□□ -1.91
TPM1	P17536	JIP3	YLR331C	378 nt		3.12	□□□□□ -1.91
TPM1	P17536	RIF2	YLR453C	1188 nt		3.12	□□□□□ -1.91
TPM1	P17536	TSR4	YOL022C	1227 nt		3.12	□□□□□ -1.91
TPM1	P17536	THI80	YOR143C	960 nt		3.12	□□□□□ -1.91
TPM1	P17536	SRL1	YOR247W	633 nt		3.12	□□□□□ -1.91
TPM1	P17536	AXL1	YPR122W	3627 nt		3.12	□□□□□ -1.91

Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms