Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCL3P10147 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL3P10147 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL3P10147 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 HLA-L-209ENST00000420110 1011 ntBASIC19.21■□□□□ 0.67
CCL3P10147 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.21■□□□□ 0.67
CCL3P10147 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.21■□□□□ 0.67
CCL3P10147 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 AC005181.1-201ENST00000604782 1256 ntBASIC19.21■□□□□ 0.67
CCL3P10147 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.21■□□□□ 0.67
CCL3P10147 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 AL050303.2-201ENST00000619798 666 ntBASIC19.21■□□□□ 0.67
CCL3P10147 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 AC013268.1-206ENST00000638368 961 ntBASIC19.21■□□□□ 0.67
CCL3P10147 AC112229.1-201ENST00000639295 961 ntBASIC19.21■□□□□ 0.67
CCL3P10147 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
CCL3P10147 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCL3P10147 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.2■□□□□ 0.66
CCL3P10147 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CCL3P10147 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCL3P10147 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL3P10147 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3P10147 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL3P10147 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCL3P10147 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.2■□□□□ 0.66
CCL3P10147 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
CCL3P10147 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.2■□□□□ 0.66
CCL3P10147 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCL3P10147 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.19■□□□□ 0.66
CCL3P10147 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL3P10147 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.19■□□□□ 0.66
CCL3P10147 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3P10147 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL3P10147 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.19■□□□□ 0.66
CCL3P10147 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCL3P10147 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3P10147 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3P10147 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCL3P10147 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCL3P10147 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CCL3P10147 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL3P10147 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL3P10147 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL3P10147 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.18■□□□□ 0.66
CCL3P10147 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL3P10147 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.18■□□□□ 0.66
CCL3P10147 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL3P10147 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.18■□□□□ 0.66
CCL3P10147 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCL3P10147 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCL3P10147 RBM17P2-201ENST00000616397 1405 ntBASIC19.17■□□□□ 0.66
CCL3P10147 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL3P10147 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCL3P10147 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.17■□□□□ 0.66
CCL3P10147 NCF1B-203ENST00000435988 1254 ntBASIC19.17■□□□□ 0.66
CCL3P10147 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.17■□□□□ 0.66
CCL3P10147 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCL3P10147 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.17■□□□□ 0.66
CCL3P10147 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CCL3P10147 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCL3P10147 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL3P10147 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.16■□□□□ 0.66
CCL3P10147 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCL3P10147 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.16■□□□□ 0.66
CCL3P10147 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCL3P10147 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCL3P10147 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCL3P10147 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms