Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF728P0DKX0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 OR7E47P-201ENST00000546390 1422 ntBASIC17.85■□□□□ 0.45
ZNF728P0DKX0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF728P0DKX0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF728P0DKX0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF728P0DKX0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF728P0DKX0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
ZNF728P0DKX0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF728P0DKX0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.83■□□□□ 0.45
ZNF728P0DKX0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 LINC01521-201ENST00000504184 1943 ntBASIC17.83■□□□□ 0.44
ZNF728P0DKX0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF728P0DKX0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 AL157384.1-201ENST00000445995 2473 ntBASIC17.82■□□□□ 0.44
ZNF728P0DKX0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.82■□□□□ 0.44
ZNF728P0DKX0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 AC105265.2-201ENST00000467189 838 ntBASIC17.81■□□□□ 0.44
ZNF728P0DKX0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF728P0DKX0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 MIR572-201ENST00000384983 95 ntBASIC17.8■□□□□ 0.44
ZNF728P0DKX0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms