Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT6AP02538 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT6AP02538 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT6AP02538 AC055733.4-201ENST00000638462 1354 ntBASIC20.34■□□□□ 0.85
KRT6AP02538 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.33■□□□□ 0.85
KRT6AP02538 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT6AP02538 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT6AP02538 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
KRT6AP02538 AC005224.4-201ENST00000583262 1652 ntBASIC20.33■□□□□ 0.85
KRT6AP02538 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT6AP02538 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT6AP02538 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
KRT6AP02538 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT6AP02538 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.33■□□□□ 0.85
KRT6AP02538 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT6AP02538 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.33■□□□□ 0.84
KRT6AP02538 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT6AP02538 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT6AP02538 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT6AP02538 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT6AP02538 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT6AP02538 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KRT6AP02538 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT6AP02538 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT6AP02538 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT6AP02538 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT6AP02538 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRT6AP02538 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KRT6AP02538 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT6AP02538 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.31■□□□□ 0.84
KRT6AP02538 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.31■□□□□ 0.84
KRT6AP02538 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
KRT6AP02538 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT6AP02538 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT6AP02538 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 AL136967.2-201ENST00000623968 743 ntBASIC20.3■□□□□ 0.84
KRT6AP02538 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT6AP02538 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT6AP02538 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT6AP02538 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT6AP02538 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT6AP02538 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT6AP02538 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT6AP02538 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT6AP02538 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT6AP02538 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT6AP02538 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT6AP02538 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT6AP02538 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KRT6AP02538 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT6AP02538 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT6AP02538 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT6AP02538 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT6AP02538 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.28■□□□□ 0.84
KRT6AP02538 AL031432.3-201ENST00000607698 485 ntBASIC20.28■□□□□ 0.84
KRT6AP02538 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT6AP02538 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT6AP02538 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6AP02538 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6AP02538 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6AP02538 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms