Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.19■■□□□ 1.62
MBD4O95243 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.19■■□□□ 1.62
MBD4O95243 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.19■■□□□ 1.62
MBD4O95243 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.19■■□□□ 1.62
MBD4O95243 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
MBD4O95243 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.19■■□□□ 1.62
MBD4O95243 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
MBD4O95243 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.19■■□□□ 1.62
MBD4O95243 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.18■■□□□ 1.62
MBD4O95243 MIR663A-201ENST00000385250 93 ntBASIC25.18■■□□□ 1.62
MBD4O95243 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.18■■□□□ 1.62
MBD4O95243 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.18■■□□□ 1.62
MBD4O95243 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.18■■□□□ 1.62
MBD4O95243 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.18■■□□□ 1.62
MBD4O95243 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MBD4O95243 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
MBD4O95243 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.17■■□□□ 1.62
MBD4O95243 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.17■■□□□ 1.62
MBD4O95243 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.17■■□□□ 1.62
MBD4O95243 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.17■■□□□ 1.62
MBD4O95243 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.17■■□□□ 1.62
MBD4O95243 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.17■■□□□ 1.62
MBD4O95243 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MBD4O95243 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.16■■□□□ 1.62
MBD4O95243 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.16■■□□□ 1.62
MBD4O95243 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.16■■□□□ 1.62
MBD4O95243 TERF1P5-201ENST00000477545 1207 ntBASIC25.16■■□□□ 1.62
MBD4O95243 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MBD4O95243 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 AC231657.2-201ENST00000624556 255 ntBASIC25.16■■□□□ 1.62
MBD4O95243 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.16■■□□□ 1.62
MBD4O95243 FBXW4P1-201ENST00000426721 2239 ntBASIC25.16■■□□□ 1.62
MBD4O95243 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MBD4O95243 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.15■■□□□ 1.62
MBD4O95243 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 AC007322.1-201ENST00000426983 750 ntBASIC25.15■■□□□ 1.62
MBD4O95243 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
MBD4O95243 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.15■■□□□ 1.62
MBD4O95243 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
MBD4O95243 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.15■■□□□ 1.62
MBD4O95243 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.15■■□□□ 1.62
MBD4O95243 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.15■■□□□ 1.62
MBD4O95243 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MBD4O95243 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
MBD4O95243 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.62
MBD4O95243 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.14■■□□□ 1.62
MBD4O95243 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.14■■□□□ 1.62
MBD4O95243 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
MBD4O95243 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
MBD4O95243 AC006970.2-201ENST00000450065 779 ntBASIC25.14■■□□□ 1.62
MBD4O95243 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.14■■□□□ 1.62
MBD4O95243 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.14■■□□□ 1.62
MBD4O95243 AL050303.2-201ENST00000619798 666 ntBASIC25.14■■□□□ 1.62
MBD4O95243 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
MBD4O95243 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MBD4O95243 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
MBD4O95243 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.13■■□□□ 1.61
MBD4O95243 RBM17P2-201ENST00000616397 1405 ntBASIC25.13■■□□□ 1.61
MBD4O95243 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MBD4O95243 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MBD4O95243 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
MBD4O95243 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.13■■□□□ 1.61
MBD4O95243 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.13■■□□□ 1.61
MBD4O95243 AC013268.1-206ENST00000638368 961 ntBASIC25.13■■□□□ 1.61
MBD4O95243 AC112229.1-201ENST00000639295 961 ntBASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms