Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRNP200O75643 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SNRNP200O75643 AL050303.2-201ENST00000619798 666 ntBASIC20.21■□□□□ 0.83
SNRNP200O75643 AC013268.1-206ENST00000638368 961 ntBASIC20.21■□□□□ 0.83
SNRNP200O75643 AC112229.1-201ENST00000639295 961 ntBASIC20.21■□□□□ 0.83
SNRNP200O75643 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.21■□□□□ 0.83
SNRNP200O75643 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SNRNP200O75643 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
SNRNP200O75643 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
SNRNP200O75643 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SNRNP200O75643 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SNRNP200O75643 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.2■□□□□ 0.82
SNRNP200O75643 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.2■□□□□ 0.82
SNRNP200O75643 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.19■□□□□ 0.82
SNRNP200O75643 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SNRNP200O75643 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.19■□□□□ 0.82
SNRNP200O75643 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.19■□□□□ 0.82
SNRNP200O75643 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SNRNP200O75643 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.19■□□□□ 0.82
SNRNP200O75643 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 Z98882.1-201ENST00000622160 2253 ntBASIC20.19■□□□□ 0.82
SNRNP200O75643 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SNRNP200O75643 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP200O75643 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP200O75643 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SNRNP200O75643 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.18■□□□□ 0.82
SNRNP200O75643 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.18■□□□□ 0.82
SNRNP200O75643 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP200O75643 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.18■□□□□ 0.82
SNRNP200O75643 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.18■□□□□ 0.82
SNRNP200O75643 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SNRNP200O75643 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.17■□□□□ 0.82
SNRNP200O75643 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP200O75643 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP200O75643 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SNRNP200O75643 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.17■□□□□ 0.82
SNRNP200O75643 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP200O75643 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP200O75643 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.17■□□□□ 0.82
SNRNP200O75643 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SNRNP200O75643 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.17■□□□□ 0.82
SNRNP200O75643 CROCCP5-201ENST00000436658 830 ntBASIC20.17■□□□□ 0.82
SNRNP200O75643 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.17■□□□□ 0.82
SNRNP200O75643 RBM17P2-201ENST00000616397 1405 ntBASIC20.16■□□□□ 0.82
SNRNP200O75643 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SNRNP200O75643 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRNP200O75643 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.16■□□□□ 0.82
SNRNP200O75643 AC010536.3-201ENST00000620306 533 ntBASIC20.16■□□□□ 0.82
SNRNP200O75643 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SNRNP200O75643 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNRNP200O75643 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SNRNP200O75643 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP200O75643 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNRNP200O75643 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms