Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SLC29A4P1-201ENST00000398760 971 ntBASIC20.21■□□□□ 0.83
SLC28A2O43868 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 AL138781.1-201ENST00000566567 1274 ntBASIC20.21■□□□□ 0.83
SLC28A2O43868 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC28A2O43868 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 AC010542.4-201ENST00000563151 1910 ntBASIC20.21■□□□□ 0.83
SLC28A2O43868 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC28A2O43868 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC28A2O43868 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A2O43868 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A2O43868 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A2O43868 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC28A2O43868 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.2■□□□□ 0.82
SLC28A2O43868 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC28A2O43868 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC28A2O43868 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC28A2O43868 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC28A2O43868 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SLC28A2O43868 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SLC28A2O43868 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC28A2O43868 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC28A2O43868 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC28A2O43868 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC28A2O43868 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC28A2O43868 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC28A2O43868 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC28A2O43868 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A2O43868 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC28A2O43868 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC28A2O43868 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A2O43868 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC28A2O43868 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC28A2O43868 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A2O43868 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
SLC28A2O43868 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC28A2O43868 OR2I1P-207ENST00000453522 948 ntBASIC20.18■□□□□ 0.82
SLC28A2O43868 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SLC28A2O43868 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A2O43868 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC28A2O43868 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC28A2O43868 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 FAM99A-202ENST00000538190 1989 ntBASIC20.17■□□□□ 0.82
SLC28A2O43868 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 AC069152.1-201ENST00000438030 544 ntBASIC20.17■□□□□ 0.82
SLC28A2O43868 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC28A2O43868 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC28A2O43868 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC28A2O43868 TPRG1LP1-201ENST00000598702 760 ntBASIC20.17■□□□□ 0.82
SLC28A2O43868 AL050303.2-201ENST00000619798 666 ntBASIC20.17■□□□□ 0.82
SLC28A2O43868 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC28A2O43868 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SLC28A2O43868 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLC28A2O43868 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
SLC28A2O43868 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC28A2O43868 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC28A2O43868 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 POU5F1P3-201ENST00000428824 1078 ntBASIC20.16■□□□□ 0.82
SLC28A2O43868 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 AC079089.2-201ENST00000531211 1277 ntBASIC20.16■□□□□ 0.82
SLC28A2O43868 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC28A2O43868 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC28A2O43868 ITM2C-210ENST00000620962 501 ntBASIC20.16■□□□□ 0.82
SLC28A2O43868 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC28A2O43868 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC28A2O43868 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC28A2O43868 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC28A2O43868 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms