Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SRGAP3O43295 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SRGAP3O43295 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 PARP1-202ENST00000366792 553 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
SRGAP3O43295 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.2■■□□□ 1.78
SRGAP3O43295 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.2■■□□□ 1.78
SRGAP3O43295 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.2■■□□□ 1.78
SRGAP3O43295 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRGAP3O43295 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.19■■□□□ 1.78
SRGAP3O43295 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SRGAP3O43295 KRT18P11-201ENST00000435214 1283 ntBASIC26.19■■□□□ 1.78
SRGAP3O43295 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.19■■□□□ 1.78
SRGAP3O43295 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.19■■□□□ 1.78
SRGAP3O43295 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SRGAP3O43295 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SRGAP3O43295 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SRGAP3O43295 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SRGAP3O43295 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SRGAP3O43295 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SRGAP3O43295 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SRGAP3O43295 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRGAP3O43295 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
SRGAP3O43295 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRGAP3O43295 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRGAP3O43295 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.18■■□□□ 1.78
SRGAP3O43295 MYCNOS-205ENST00000641950 531 ntBASIC26.18■■□□□ 1.78
SRGAP3O43295 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SRGAP3O43295 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.18■■□□□ 1.78
SRGAP3O43295 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
SRGAP3O43295 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SRGAP3O43295 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.17■■□□□ 1.78
SRGAP3O43295 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SRGAP3O43295 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SRGAP3O43295 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.17■■□□□ 1.78
SRGAP3O43295 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SRGAP3O43295 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.17■■□□□ 1.78
SRGAP3O43295 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SRGAP3O43295 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
SRGAP3O43295 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.17■■□□□ 1.78
SRGAP3O43295 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.17■■□□□ 1.78
SRGAP3O43295 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SRGAP3O43295 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.16■■□□□ 1.78
SRGAP3O43295 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SRGAP3O43295 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SRGAP3O43295 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SRGAP3O43295 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.16■■□□□ 1.78
SRGAP3O43295 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SRGAP3O43295 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SRGAP3O43295 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SRGAP3O43295 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
SRGAP3O43295 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.16■■□□□ 1.78
SRGAP3O43295 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SRGAP3O43295 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 DLX3-202ENST00000512495 834 ntTSL 2 BASIC26.15■■□□□ 1.78
SRGAP3O43295 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC26.15■■□□□ 1.78
SRGAP3O43295 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 MFSD11-216ENST00000590393 1141 ntBASIC26.15■■□□□ 1.78
SRGAP3O43295 BID-214ENST00000617586 542 ntTSL 5 BASIC26.15■■□□□ 1.78
SRGAP3O43295 AC120498.10-201ENST00000621827 505 ntBASIC26.15■■□□□ 1.78
SRGAP3O43295 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.15■■□□□ 1.78
SRGAP3O43295 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SRGAP3O43295 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
SRGAP3O43295 KRT16P2-201ENST00000414673 1423 ntBASIC26.14■■□□□ 1.78
SRGAP3O43295 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SRGAP3O43295 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SRGAP3O43295 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SRGAP3O43295 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SRGAP3O43295 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
SRGAP3O43295 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SRGAP3O43295 AC011767.1-201ENST00000617410 1153 ntBASIC26.14■■□□□ 1.78
SRGAP3O43295 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SRGAP3O43295 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.14■■□□□ 1.78
SRGAP3O43295 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
SRGAP3O43295 Z98882.1-201ENST00000622160 2253 ntBASIC26.14■■□□□ 1.77
SRGAP3O43295 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.14■■□□□ 1.77
SRGAP3O43295 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SRGAP3O43295 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SRGAP3O43295 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.77
SRGAP3O43295 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SRGAP3O43295 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
SRGAP3O43295 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
SRGAP3O43295 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SRGAP3O43295 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SRGAP3O43295 BRI3-207ENST00000539286 699 ntTSL 2 BASIC26.13■■□□□ 1.77
SRGAP3O43295 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.13■■□□□ 1.77
SRGAP3O43295 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.13■■□□□ 1.77
SRGAP3O43295 SLC7A5P1-201ENST00000568957 537 ntBASIC26.13■■□□□ 1.77
SRGAP3O43295 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SRGAP3O43295 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms