Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
FOXN1O15353 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXN1O15353 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
FOXN1O15353 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXN1O15353 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.21■■□□□ 1.63
FOXN1O15353 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.21■■□□□ 1.63
FOXN1O15353 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 AL117328.2-201ENST00000624617 1940 ntBASIC25.21■■□□□ 1.63
FOXN1O15353 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
FOXN1O15353 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
FOXN1O15353 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
FOXN1O15353 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
FOXN1O15353 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
FOXN1O15353 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 ARMC10P1-201ENST00000313754 855 ntBASIC25.2■■□□□ 1.62
FOXN1O15353 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC25.2■■□□□ 1.62
FOXN1O15353 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 RPPH1-201ENST00000516869 333 ntBASIC25.2■■□□□ 1.62
FOXN1O15353 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
FOXN1O15353 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
FOXN1O15353 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.2■■□□□ 1.62
FOXN1O15353 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
FOXN1O15353 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.2■■□□□ 1.62
FOXN1O15353 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
FOXN1O15353 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC25.19■■□□□ 1.62
FOXN1O15353 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.19■■□□□ 1.62
FOXN1O15353 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25.19■■□□□ 1.62
FOXN1O15353 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.19■■□□□ 1.62
FOXN1O15353 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 AC133561.5-201ENST00000635547 218 ntBASIC25.19■■□□□ 1.62
FOXN1O15353 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 AC005224.4-201ENST00000583262 1652 ntBASIC25.19■■□□□ 1.62
FOXN1O15353 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
FOXN1O15353 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
FOXN1O15353 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
FOXN1O15353 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.18■■□□□ 1.62
FOXN1O15353 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 TERF1P5-201ENST00000477545 1207 ntBASIC25.18■■□□□ 1.62
FOXN1O15353 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.18■■□□□ 1.62
FOXN1O15353 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.18■■□□□ 1.62
FOXN1O15353 AC008694.1-202ENST00000636953 945 ntBASIC25.18■■□□□ 1.62
FOXN1O15353 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.18■■□□□ 1.62
FOXN1O15353 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
FOXN1O15353 AL353803.4-201ENST00000565882 1934 ntBASIC25.18■■□□□ 1.62
FOXN1O15353 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.18■■□□□ 1.62
FOXN1O15353 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.17■■□□□ 1.62
FOXN1O15353 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXN1O15353 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXN1O15353 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
FOXN1O15353 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.17■■□□□ 1.62
FOXN1O15353 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
FOXN1O15353 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.17■■□□□ 1.62
FOXN1O15353 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.17■■□□□ 1.62
FOXN1O15353 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.17■■□□□ 1.62
FOXN1O15353 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
FOXN1O15353 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.16■■□□□ 1.62
FOXN1O15353 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.16■■□□□ 1.62
FOXN1O15353 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
FOXN1O15353 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.16■■□□□ 1.62
FOXN1O15353 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.16■■□□□ 1.62
FOXN1O15353 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
FOXN1O15353 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXN1O15353 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXN1O15353 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
FOXN1O15353 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.15■■□□□ 1.62
FOXN1O15353 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXN1O15353 C1QBPP2-201ENST00000528754 825 ntBASIC25.15■■□□□ 1.62
FOXN1O15353 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
FOXN1O15353 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXN1O15353 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.15■■□□□ 1.62
FOXN1O15353 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms