Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.5■■□□□ 1.83
NPHP1O15259 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.5■■□□□ 1.83
NPHP1O15259 AL162412.1-201ENST00000567129 965 ntBASIC26.5■■□□□ 1.83
NPHP1O15259 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.5■■□□□ 1.83
NPHP1O15259 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPHP1O15259 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.49■■□□□ 1.83
NPHP1O15259 AC137767.1-201ENST00000602918 1920 ntBASIC26.49■■□□□ 1.83
NPHP1O15259 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP1O15259 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.49■■□□□ 1.83
NPHP1O15259 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP1O15259 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.49■■□□□ 1.83
NPHP1O15259 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
NPHP1O15259 AC128676.1-201ENST00000454392 318 ntBASIC26.49■■□□□ 1.83
NPHP1O15259 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP1O15259 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
NPHP1O15259 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.49■■□□□ 1.83
NPHP1O15259 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.49■■□□□ 1.83
NPHP1O15259 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP1O15259 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
NPHP1O15259 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.48■■□□□ 1.83
NPHP1O15259 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NPHP1O15259 BAALC-201ENST00000297574 801 ntTSL 3 BASIC26.48■■□□□ 1.83
NPHP1O15259 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NPHP1O15259 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.48■■□□□ 1.83
NPHP1O15259 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NPHP1O15259 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NPHP1O15259 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.48■■□□□ 1.83
NPHP1O15259 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NPHP1O15259 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.47■■□□□ 1.83
NPHP1O15259 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.47■■□□□ 1.83
NPHP1O15259 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
NPHP1O15259 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26.47■■□□□ 1.83
NPHP1O15259 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
NPHP1O15259 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.47■■□□□ 1.83
NPHP1O15259 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NPHP1O15259 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
NPHP1O15259 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.46■■□□□ 1.83
NPHP1O15259 AC061975.6-201ENST00000579045 1553 ntBASIC26.46■■□□□ 1.83
NPHP1O15259 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.46■■□□□ 1.83
NPHP1O15259 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
NPHP1O15259 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
NPHP1O15259 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.46■■□□□ 1.83
NPHP1O15259 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.46■■□□□ 1.83
NPHP1O15259 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPHP1O15259 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
NPHP1O15259 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
NPHP1O15259 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NPHP1O15259 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NPHP1O15259 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NPHP1O15259 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.45■■□□□ 1.82
NPHP1O15259 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NPHP1O15259 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NPHP1O15259 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
NPHP1O15259 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NPHP1O15259 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
NPHP1O15259 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
NPHP1O15259 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.44■■□□□ 1.82
NPHP1O15259 RPS2P4-201ENST00000476944 856 ntBASIC26.44■■□□□ 1.82
NPHP1O15259 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC26.44■■□□□ 1.82
NPHP1O15259 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NPHP1O15259 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.44■■□□□ 1.82
NPHP1O15259 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.44■■□□□ 1.82
NPHP1O15259 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.44■■□□□ 1.82
NPHP1O15259 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC26.44■■□□□ 1.82
NPHP1O15259 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NPHP1O15259 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NPHP1O15259 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPHP1O15259 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPHP1O15259 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC26.43■■□□□ 1.82
NPHP1O15259 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
NPHP1O15259 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC26.43■■□□□ 1.82
NPHP1O15259 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPHP1O15259 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.43■■□□□ 1.82
NPHP1O15259 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.43■■□□□ 1.82
NPHP1O15259 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.43■■□□□ 1.82
NPHP1O15259 AC243732.1-201ENST00000612648 864 ntBASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms