Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC34.68■■■■□ 3.14
CHD1O14646 RNF146-204ENST00000476956 884 ntTSL 2 BASIC34.68■■■■□ 3.14
CHD1O14646 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC34.68■■■■□ 3.14
CHD1O14646 NT5C-211ENST00000582170 653 ntTSL 3 BASIC34.68■■■■□ 3.14
CHD1O14646 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
CHD1O14646 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
CHD1O14646 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CHD1O14646 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC34.68■■■■□ 3.14
CHD1O14646 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CHD1O14646 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC34.67■■■■□ 3.14
CHD1O14646 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC34.67■■■■□ 3.14
CHD1O14646 AC100791.3-201ENST00000617619 330 ntBASIC34.67■■■■□ 3.14
CHD1O14646 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC34.67■■■■□ 3.14
CHD1O14646 LINC00526-201ENST00000581067 1875 ntBASIC34.67■■■■□ 3.14
CHD1O14646 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CHD1O14646 AL353708.3-201ENST00000610272 989 ntBASIC34.67■■■■□ 3.14
CHD1O14646 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHD1O14646 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CHD1O14646 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHD1O14646 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CHD1O14646 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC34.66■■■■□ 3.14
CHD1O14646 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC34.66■■■■□ 3.14
CHD1O14646 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
CHD1O14646 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
CHD1O14646 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
CHD1O14646 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC34.65■■■■□ 3.14
CHD1O14646 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
CHD1O14646 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CHD1O14646 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CHD1O14646 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC34.64■■■■□ 3.14
CHD1O14646 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC34.64■■■■□ 3.14
CHD1O14646 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC34.64■■■■□ 3.14
CHD1O14646 AC091799.1-201ENST00000422823 811 ntBASIC34.64■■■■□ 3.14
CHD1O14646 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CHD1O14646 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CHD1O14646 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
CHD1O14646 AC061975.6-201ENST00000579045 1553 ntBASIC34.63■■■■□ 3.13
CHD1O14646 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC34.63■■■■□ 3.13
CHD1O14646 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CHD1O14646 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CHD1O14646 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC34.63■■■■□ 3.13
CHD1O14646 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC34.63■■■■□ 3.13
CHD1O14646 REXO2-208ENST00000539754 791 ntTSL 2 BASIC34.63■■■■□ 3.13
CHD1O14646 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC34.63■■■■□ 3.13
CHD1O14646 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC34.63■■■■□ 3.13
CHD1O14646 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC34.63■■■■□ 3.13
CHD1O14646 MTDHP1-201ENST00000605323 784 ntBASIC34.63■■■■□ 3.13
CHD1O14646 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
CHD1O14646 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
CHD1O14646 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC34.63■■■■□ 3.13
CHD1O14646 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC34.63■■■■□ 3.13
CHD1O14646 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CHD1O14646 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHD1O14646 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC34.62■■■■□ 3.13
CHD1O14646 AL049597.2-201ENST00000565575 961 ntBASIC34.62■■■■□ 3.13
CHD1O14646 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC34.62■■■■□ 3.13
CHD1O14646 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC34.62■■■■□ 3.13
CHD1O14646 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHD1O14646 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
CHD1O14646 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC34.62■■■■□ 3.13
CHD1O14646 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHD1O14646 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHD1O14646 EED-207ENST00000528180 1745 ntTSL 5 BASIC34.61■■■■□ 3.13
CHD1O14646 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 AC138932.3-201ENST00000567634 1902 ntBASIC34.61■■■■□ 3.13
CHD1O14646 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 AC239809.2-201ENST00000415381 517 ntBASIC34.61■■■■□ 3.13
CHD1O14646 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC34.61■■■■□ 3.13
CHD1O14646 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC34.61■■■■□ 3.13
CHD1O14646 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CHD1O14646 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC34.6■■■■□ 3.13
CHD1O14646 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC34.6■■■■□ 3.13
CHD1O14646 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC34.6■■■■□ 3.13
CHD1O14646 AL589743.5-201ENST00000616611 1050 ntBASIC34.6■■■■□ 3.13
CHD1O14646 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC34.6■■■■□ 3.13
CHD1O14646 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CHD1O14646 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC34.59■■■■□ 3.13
CHD1O14646 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC34.59■■■■□ 3.13
CHD1O14646 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
CHD1O14646 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC34.59■■■■□ 3.13
CHD1O14646 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC34.59■■■■□ 3.13
CHD1O14646 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC34.59■■■■□ 3.13
CHD1O14646 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC34.59■■■■□ 3.13
CHD1O14646 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CHD1O14646 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
CHD1O14646 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 TK2-204ENST00000525974 1178 ntTSL 2 BASIC34.58■■■■□ 3.13
CHD1O14646 P4HB-223ENST00000576390 439 ntTSL 4 BASIC34.58■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms