Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.59■□□□□ 0.73
AP3D1O14617 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AP3D1O14617 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
AP3D1O14617 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
AP3D1O14617 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.59■□□□□ 0.73
AP3D1O14617 FEM1AP4-201ENST00000443167 1987 ntBASIC19.59■□□□□ 0.73
AP3D1O14617 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.59■□□□□ 0.73
AP3D1O14617 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
AP3D1O14617 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3D1O14617 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.58■□□□□ 0.73
AP3D1O14617 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3D1O14617 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
AP3D1O14617 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AP3D1O14617 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
AP3D1O14617 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.58■□□□□ 0.72
AP3D1O14617 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
AP3D1O14617 AL136967.2-201ENST00000623968 743 ntBASIC19.58■□□□□ 0.72
AP3D1O14617 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
AP3D1O14617 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
AP3D1O14617 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.58■□□□□ 0.72
AP3D1O14617 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AP3D1O14617 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
AP3D1O14617 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
AP3D1O14617 RASA4CP-201ENST00000424092 1398 ntBASIC19.57■□□□□ 0.72
AP3D1O14617 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3D1O14617 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
AP3D1O14617 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3D1O14617 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3D1O14617 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.57■□□□□ 0.72
AP3D1O14617 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AP3D1O14617 SUDS3P1-201ENST00000505831 966 ntBASIC19.57■□□□□ 0.72
AP3D1O14617 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.57■□□□□ 0.72
AP3D1O14617 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.57■□□□□ 0.72
AP3D1O14617 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.57■□□□□ 0.72
AP3D1O14617 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AP3D1O14617 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3D1O14617 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
AP3D1O14617 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
AP3D1O14617 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP3D1O14617 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
AP3D1O14617 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.56■□□□□ 0.72
AP3D1O14617 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 AC091305.1-201ENST00000479476 895 ntBASIC19.56■□□□□ 0.72
AP3D1O14617 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3D1O14617 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3D1O14617 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
AP3D1O14617 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP3D1O14617 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.56■□□□□ 0.72
AP3D1O14617 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.55■□□□□ 0.72
AP3D1O14617 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3D1O14617 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.55■□□□□ 0.72
AP3D1O14617 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3D1O14617 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3D1O14617 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP3D1O14617 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.55■□□□□ 0.72
AP3D1O14617 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.55■□□□□ 0.72
AP3D1O14617 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 AF106564.1-201ENST00000607058 2553 ntBASIC19.54■□□□□ 0.72
AP3D1O14617 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.54■□□□□ 0.72
AP3D1O14617 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.54■□□□□ 0.72
AP3D1O14617 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
AP3D1O14617 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AP3D1O14617 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.54■□□□□ 0.72
AP3D1O14617 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP3D1O14617 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.53■□□□□ 0.72
AP3D1O14617 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AP3D1O14617 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms