Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 MYCNOS-205ENST00000641950 531 ntBASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV25A0A0B4J276 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 BID-214ENST00000617586 542 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 BID-212ENST00000614949 1988 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV25A0A0B4J276 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 AC244015.2-201ENST00000616358 1861 ntBASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV25A0A0B4J276 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 UBE2DNL-204ENST00000602536 740 ntBASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 AC079834.2-201ENST00000609776 1949 ntBASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
TRAV25A0A0B4J276 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms