Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.35■■□□□ 1.01
RAI2Q9Y5P3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 AC244015.2-201ENST00000616358 1861 ntBASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAI2Q9Y5P3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAI2Q9Y5P3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.33■■□□□ 1
RAI2Q9Y5P3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.33■■□□□ 1
RAI2Q9Y5P3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAI2Q9Y5P3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI2Q9Y5P3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAI2Q9Y5P3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RAI2Q9Y5P3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.32■■□□□ 1
RAI2Q9Y5P3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI2Q9Y5P3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI2Q9Y5P3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RAI2Q9Y5P3 AC138907.5-202ENST00000569484 235 ntBASIC21.32■■□□□ 1
RAI2Q9Y5P3 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.32■■□□□ 1
RAI2Q9Y5P3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAI2Q9Y5P3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RAI2Q9Y5P3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 KRT19P1-201ENST00000405746 1186 ntBASIC21.31■■□□□ 1
RAI2Q9Y5P3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 AP001160.3-201ENST00000601484 763 ntBASIC21.31■■□□□ 1
RAI2Q9Y5P3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAI2Q9Y5P3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.31■■□□□ 1
RAI2Q9Y5P3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAI2Q9Y5P3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.3■■□□□ 1
RAI2Q9Y5P3 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.29■■□□□ 1
RAI2Q9Y5P3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RAI2Q9Y5P3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms