Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN16Q9Y5I7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN16Q9Y5I7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 AL137784.2-201ENST00000607332 1000 ntBASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN16Q9Y5I7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 SLC7A5P1-201ENST00000568957 537 ntBASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 MFSD11-216ENST00000590393 1141 ntBASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN16Q9Y5I7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 AC008175.2-201ENST00000612840 297 ntBASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 MYCNOS-205ENST00000641950 531 ntBASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLDN16Q9Y5I7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 AC004911.1-201ENST00000416316 871 ntBASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 KRT18P11-201ENST00000435214 1283 ntBASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN16Q9Y5I7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 AC016769.1-201ENST00000409132 1010 ntBASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN16Q9Y5I7 AC011767.1-201ENST00000617410 1153 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms