Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA6Q9Y5G7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 AC087742.1-201ENST00000575880 1738 ntBASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 AC026310.3-201ENST00000625186 2373 ntBASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 MFSD11-216ENST00000590393 1141 ntBASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 AC104187.1-201ENST00000607510 612 ntBASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 AL109923.1-201ENST00000618799 583 ntBASIC20.27■□□□□ 0.84
PCDHGA6Q9Y5G7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA6Q9Y5G7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA6Q9Y5G7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA6Q9Y5G7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 MIR663A-201ENST00000385250 93 ntBASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA6Q9Y5G7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA6Q9Y5G7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 GPX1P1-201ENST00000388829 606 ntBASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 AC231657.2-201ENST00000624556 255 ntBASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA6Q9Y5G7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA6Q9Y5G7 AC055733.4-201ENST00000638462 1354 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms