Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 GABARAPL3-202ENST00000624044 1851 ntBASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.34■□□□□ 0.37
LSM5Q9Y4Y9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM5Q9Y4Y9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM5Q9Y4Y9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 AFG3L1P-217ENST00000557444 2447 ntBASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM5Q9Y4Y9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM5Q9Y4Y9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 AC079089.2-201ENST00000531211 1277 ntBASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 OR7E47P-201ENST00000546390 1422 ntBASIC17.3■□□□□ 0.36
LSM5Q9Y4Y9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 AP005212.1-201ENST00000581547 1997 ntBASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LSM5Q9Y4Y9 AC073314.1-201ENST00000568729 2216 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms