Protein–RNA interactions for Protein: Q9UQQ2

SH2B3, SH2B adapter protein 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3Q9UQQ2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
SH2B3Q9UQQ2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 AL137060.1-201ENST00000618151 2648 ntBASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 AF106564.1-201ENST00000607058 2553 ntBASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH2B3Q9UQQ2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 AP004607.4-201ENST00000530158 1459 ntBASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH2B3Q9UQQ2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 AC053503.5-201ENST00000601508 636 ntBASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH2B3Q9UQQ2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 MIR935-201ENST00000401179 91 ntBASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 AC104187.1-201ENST00000607510 612 ntBASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 AL024507.2-201ENST00000606070 2574 ntBASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.34■□□□□ 0.85
SH2B3Q9UQQ2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 AC034268.1-201ENST00000441047 882 ntBASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH2B3Q9UQQ2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2B3Q9UQQ2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SH2B3Q9UQQ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2B3Q9UQQ2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SH2B3Q9UQQ2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SH2B3Q9UQQ2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms