Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.52■□□□□ 0.4
RPUSD1Q9UJJ7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPUSD1Q9UJJ7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RPUSD1Q9UJJ7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPUSD1Q9UJJ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RPUSD1Q9UJJ7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPUSD1Q9UJJ7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RPUSD1Q9UJJ7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 AC138907.5-202ENST00000569484 235 ntBASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 IKBKGP1-201ENST00000612193 1073 ntBASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RPUSD1Q9UJJ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 AC016769.1-201ENST00000409132 1010 ntBASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 AP001160.3-201ENST00000601484 763 ntBASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 AL137784.2-201ENST00000607332 1000 ntBASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.5■□□□□ 0.39
RPUSD1Q9UJJ7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 AC010141.2-201ENST00000452426 721 ntBASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 AC092437.1-201ENST00000624794 1048 ntBASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RPUSD1Q9UJJ7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 AC006015.1-201ENST00000429970 570 ntBASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 PKD1P6-201ENST00000343738 4769 ntBASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RPUSD1Q9UJJ7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 KRT18P11-201ENST00000435214 1283 ntBASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RPUSD1Q9UJJ7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms