Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.6■■□□□ 1.05
SP110Q9HB58 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SP110Q9HB58 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SP110Q9HB58 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.6■■□□□ 1.05
SP110Q9HB58 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SP110Q9HB58 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SP110Q9HB58 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SP110Q9HB58 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SP110Q9HB58 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SP110Q9HB58 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SP110Q9HB58 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.59■■□□□ 1.05
SP110Q9HB58 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.59■■□□□ 1.05
SP110Q9HB58 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.59■■□□□ 1.05
SP110Q9HB58 NTF6G-201ENST00000591094 616 ntBASIC21.59■■□□□ 1.05
SP110Q9HB58 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SP110Q9HB58 AC104187.1-201ENST00000607510 612 ntBASIC21.59■■□□□ 1.05
SP110Q9HB58 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SP110Q9HB58 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SP110Q9HB58 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.59■■□□□ 1.05
SP110Q9HB58 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.59■■□□□ 1.05
SP110Q9HB58 AP004607.4-201ENST00000530158 1459 ntBASIC21.58■■□□□ 1.05
SP110Q9HB58 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SP110Q9HB58 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SP110Q9HB58 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SP110Q9HB58 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
SP110Q9HB58 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
SP110Q9HB58 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.58■■□□□ 1.05
SP110Q9HB58 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.58■■□□□ 1.05
SP110Q9HB58 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.58■■□□□ 1.05
SP110Q9HB58 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.58■■□□□ 1.05
SP110Q9HB58 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SP110Q9HB58 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SP110Q9HB58 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.58■■□□□ 1.04
SP110Q9HB58 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.57■■□□□ 1.04
SP110Q9HB58 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SP110Q9HB58 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.57■■□□□ 1.04
SP110Q9HB58 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SP110Q9HB58 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.57■■□□□ 1.04
SP110Q9HB58 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SP110Q9HB58 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.57■■□□□ 1.04
SP110Q9HB58 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.57■■□□□ 1.04
SP110Q9HB58 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SP110Q9HB58 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.56■■□□□ 1.04
SP110Q9HB58 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SP110Q9HB58 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.56■■□□□ 1.04
SP110Q9HB58 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.56■■□□□ 1.04
SP110Q9HB58 KRT18P5-201ENST00000436075 1291 ntBASIC21.56■■□□□ 1.04
SP110Q9HB58 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.56■■□□□ 1.04
SP110Q9HB58 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.56■■□□□ 1.04
SP110Q9HB58 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.56■■□□□ 1.04
SP110Q9HB58 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SP110Q9HB58 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.55■■□□□ 1.04
SP110Q9HB58 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.55■■□□□ 1.04
SP110Q9HB58 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.55■■□□□ 1.04
SP110Q9HB58 KRT19P1-201ENST00000405746 1186 ntBASIC21.55■■□□□ 1.04
SP110Q9HB58 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SP110Q9HB58 AL162430.1-201ENST00000480705 870 ntBASIC21.55■■□□□ 1.04
SP110Q9HB58 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.55■■□□□ 1.04
SP110Q9HB58 AC138907.5-202ENST00000569484 235 ntBASIC21.55■■□□□ 1.04
SP110Q9HB58 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SP110Q9HB58 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms