Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC22.68■■□□□ 1.22
CDH23Q9H251 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
CDH23Q9H251 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.68■■□□□ 1.22
CDH23Q9H251 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDH23Q9H251 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CDH23Q9H251 AP004607.7-201ENST00000527152 1677 ntBASIC22.67■■□□□ 1.22
CDH23Q9H251 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.67■■□□□ 1.22
CDH23Q9H251 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 TMPOP1-202ENST00000424642 1267 ntBASIC22.67■■□□□ 1.22
CDH23Q9H251 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.67■■□□□ 1.22
CDH23Q9H251 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.67■■□□□ 1.22
CDH23Q9H251 CD177P1-201ENST00000606252 935 ntBASIC22.67■■□□□ 1.22
CDH23Q9H251 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CDH23Q9H251 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.67■■□□□ 1.22
CDH23Q9H251 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.67■■□□□ 1.22
CDH23Q9H251 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CDH23Q9H251 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CDH23Q9H251 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.66■■□□□ 1.22
CDH23Q9H251 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.66■■□□□ 1.22
CDH23Q9H251 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.66■■□□□ 1.22
CDH23Q9H251 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CDH23Q9H251 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH23Q9H251 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.66■■□□□ 1.22
CDH23Q9H251 RPS2P55-201ENST00000397318 883 ntBASIC22.66■■□□□ 1.22
CDH23Q9H251 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.66■■□□□ 1.22
CDH23Q9H251 AC107956.1-201ENST00000494359 873 ntBASIC22.66■■□□□ 1.22
CDH23Q9H251 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CDH23Q9H251 RBM17P2-201ENST00000616397 1405 ntBASIC22.65■■□□□ 1.22
CDH23Q9H251 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH23Q9H251 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.65■■□□□ 1.22
CDH23Q9H251 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH23Q9H251 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
CDH23Q9H251 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.65■■□□□ 1.22
CDH23Q9H251 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 AC087499.1-201ENST00000418141 1075 ntBASIC22.65■■□□□ 1.22
CDH23Q9H251 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.65■■□□□ 1.22
CDH23Q9H251 HLA-B-256ENST00000639848 1089 ntBASIC22.65■■□□□ 1.22
CDH23Q9H251 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CDH23Q9H251 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDH23Q9H251 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.64■■□□□ 1.22
CDH23Q9H251 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
CDH23Q9H251 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDH23Q9H251 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDH23Q9H251 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH23Q9H251 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.64■■□□□ 1.21
CDH23Q9H251 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CDH23Q9H251 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH23Q9H251 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDH23Q9H251 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDH23Q9H251 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
CDH23Q9H251 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.63■■□□□ 1.21
CDH23Q9H251 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 AC060766.5-201ENST00000590539 871 ntBASIC22.63■■□□□ 1.21
CDH23Q9H251 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.63■■□□□ 1.21
CDH23Q9H251 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDH23Q9H251 AL355075.4-201ENST00000554988 638 ntBASIC22.63■■□□□ 1.21
CDH23Q9H251 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CDH23Q9H251 LINC01124-201ENST00000409786 2117 ntBASIC22.63■■□□□ 1.21
CDH23Q9H251 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.63■■□□□ 1.21
CDH23Q9H251 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.63■■□□□ 1.21
CDH23Q9H251 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.63■■□□□ 1.21
CDH23Q9H251 MIR4785-201ENST00000585005 73 ntBASIC22.63■■□□□ 1.21
CDH23Q9H251 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.63■■□□□ 1.21
CDH23Q9H251 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CDH23Q9H251 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 AL355472.2-201ENST00000422958 438 ntBASIC22.62■■□□□ 1.21
CDH23Q9H251 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDH23Q9H251 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CDH23Q9H251 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.62■■□□□ 1.21
CDH23Q9H251 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.62■■□□□ 1.21
CDH23Q9H251 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDH23Q9H251 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.62■■□□□ 1.21
CDH23Q9H251 RN7SL471P-201ENST00000580476 299 ntBASIC22.62■■□□□ 1.21
CDH23Q9H251 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CDH23Q9H251 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDH23Q9H251 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.62■■□□□ 1.21
CDH23Q9H251 AC020928.2-201ENST00000588717 2197 ntBASIC22.62■■□□□ 1.21
CDH23Q9H251 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms