Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L2-201ENST00000561772 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 CCDC92B-201ENST00000575506 885 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L6-201ENST00000626483 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L1-201ENST00000627662 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L8-201ENST00000629013 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L3-201ENST00000630187 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L7-201ENST00000630678 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 DUX4L5-201ENST00000630834 1275 ntBASIC19.46■□□□□ 0.71
TM9SF2Q99805 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TM9SF2Q99805 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF2Q99805 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 KRT18P14-201ENST00000534205 1250 ntBASIC19.45■□□□□ 0.7
TM9SF2Q99805 TERF1P2-201ENST00000583350 1212 ntBASIC19.45■□□□□ 0.7
TM9SF2Q99805 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TM9SF2Q99805 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF2Q99805 OXCT2P1-201ENST00000447263 1535 ntBASIC19.45■□□□□ 0.7
TM9SF2Q99805 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.44■□□□□ 0.7
TM9SF2Q99805 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TM9SF2Q99805 KRT18P5-201ENST00000436075 1291 ntBASIC19.44■□□□□ 0.7
TM9SF2Q99805 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.44■□□□□ 0.7
TM9SF2Q99805 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF2Q99805 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF2Q99805 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF2Q99805 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF2Q99805 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF2Q99805 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF2Q99805 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TM9SF2Q99805 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 BX005040.4-201ENST00000637145 1518 ntBASIC19.42■□□□□ 0.7
TM9SF2Q99805 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF2Q99805 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TM9SF2Q99805 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF2Q99805 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TM9SF2Q99805 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF2Q99805 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.41■□□□□ 0.7
TM9SF2Q99805 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TM9SF2Q99805 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms