Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS2Q99743 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS2Q99743 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS2Q99743 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS2Q99743 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.56■□□□□ 0.88
NPAS2Q99743 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.56■□□□□ 0.88
NPAS2Q99743 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NPAS2Q99743 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NPAS2Q99743 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NPAS2Q99743 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS2Q99743 LINC01006-201ENST00000333319 2292 ntBASIC20.55■□□□□ 0.88
NPAS2Q99743 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS2Q99743 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.55■□□□□ 0.88
NPAS2Q99743 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAS2Q99743 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.55■□□□□ 0.88
NPAS2Q99743 AC010525.1-201ENST00000585559 441 ntBASIC20.55■□□□□ 0.88
NPAS2Q99743 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS2Q99743 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS2Q99743 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPAS2Q99743 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NPAS2Q99743 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NPAS2Q99743 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS2Q99743 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NPAS2Q99743 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.54■□□□□ 0.88
NPAS2Q99743 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPAS2Q99743 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.54■□□□□ 0.88
NPAS2Q99743 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAS2Q99743 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
NPAS2Q99743 IRS3P-201ENST00000223076 1006 ntBASIC20.53■□□□□ 0.88
NPAS2Q99743 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAS2Q99743 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAS2Q99743 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.53■□□□□ 0.88
NPAS2Q99743 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NPAS2Q99743 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPAS2Q99743 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NPAS2Q99743 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.53■□□□□ 0.88
NPAS2Q99743 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.53■□□□□ 0.88
NPAS2Q99743 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS2Q99743 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NPAS2Q99743 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS2Q99743 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NPAS2Q99743 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
NPAS2Q99743 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NPAS2Q99743 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NPAS2Q99743 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NPAS2Q99743 AC126544.1-201ENST00000580842 1059 ntBASIC20.52■□□□□ 0.88
NPAS2Q99743 AC104564.3-201ENST00000582367 638 ntBASIC20.52■□□□□ 0.88
NPAS2Q99743 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.52■□□□□ 0.88
NPAS2Q99743 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NPAS2Q99743 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAS2Q99743 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.52■□□□□ 0.88
NPAS2Q99743 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS2Q99743 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS2Q99743 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS2Q99743 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPAS2Q99743 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NPAS2Q99743 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS2Q99743 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS2Q99743 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS2Q99743 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS2Q99743 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 AC079089.2-201ENST00000531211 1277 ntBASIC20.51■□□□□ 0.87
NPAS2Q99743 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAS2Q99743 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
NPAS2Q99743 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAS2Q99743 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
NPAS2Q99743 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
NPAS2Q99743 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
NPAS2Q99743 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 OR2I1P-207ENST00000453522 948 ntBASIC20.5■□□□□ 0.87
NPAS2Q99743 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.5■□□□□ 0.87
NPAS2Q99743 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAS2Q99743 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms