Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 REXO1L12P-201ENST00000622156 912 ntBASIC17.99■□□□□ 0.47
SPG11Q96JI7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.99■□□□□ 0.47
SPG11Q96JI7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SPG11Q96JI7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SPG11Q96JI7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 SNORA78-201ENST00000459373 127 ntBASIC17.98■□□□□ 0.47
SPG11Q96JI7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SPG11Q96JI7 AL359736.2-201ENST00000621992 437 ntBASIC17.98■□□□□ 0.47
SPG11Q96JI7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.98■□□□□ 0.47
SPG11Q96JI7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 BX088651.1-201ENST00000540551 451 ntBASIC17.97■□□□□ 0.47
SPG11Q96JI7 AL445228.2-201ENST00000605589 952 ntBASIC17.97■□□□□ 0.47
SPG11Q96JI7 KRT17P1-201ENST00000399211 1546 ntBASIC17.97■□□□□ 0.47
SPG11Q96JI7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SPG11Q96JI7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.97■□□□□ 0.47
SPG11Q96JI7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SPG11Q96JI7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
SPG11Q96JI7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.96■□□□□ 0.47
SPG11Q96JI7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.96■□□□□ 0.47
SPG11Q96JI7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.96■□□□□ 0.47
SPG11Q96JI7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
SPG11Q96JI7 AC120498.10-201ENST00000621827 505 ntBASIC17.96■□□□□ 0.47
SPG11Q96JI7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.96■□□□□ 0.46
SPG11Q96JI7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
SPG11Q96JI7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.96■□□□□ 0.46
SPG11Q96JI7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.46
SPG11Q96JI7 CYP2T3P-201ENST00000601990 817 ntBASIC17.96■□□□□ 0.46
SPG11Q96JI7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.96■□□□□ 0.46
SPG11Q96JI7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SPG11Q96JI7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 ANOS2P-203ENST00000472227 1816 ntBASIC17.95■□□□□ 0.46
SPG11Q96JI7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.95■□□□□ 0.46
SPG11Q96JI7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SPG11Q96JI7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.95■□□□□ 0.46
SPG11Q96JI7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.94■□□□□ 0.46
SPG11Q96JI7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SPG11Q96JI7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms