Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMD4Q96H15 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMD4Q96H15 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TIMD4Q96H15 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 AC242852.2-201ENST00000615738 1807 ntBASIC17.7■□□□□ 0.42
TIMD4Q96H15 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 AC010536.3-201ENST00000620306 533 ntBASIC17.7■□□□□ 0.42
TIMD4Q96H15 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 AC003102.1-202ENST00000563394 1796 ntBASIC17.7■□□□□ 0.42
TIMD4Q96H15 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TIMD4Q96H15 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.7■□□□□ 0.42
TIMD4Q96H15 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 MIR663A-201ENST00000385250 93 ntBASIC17.69■□□□□ 0.42
TIMD4Q96H15 RAP2CP1-201ENST00000605103 478 ntBASIC17.69■□□□□ 0.42
TIMD4Q96H15 AC013268.1-206ENST00000638368 961 ntBASIC17.69■□□□□ 0.42
TIMD4Q96H15 AC112229.1-201ENST00000639295 961 ntBASIC17.69■□□□□ 0.42
TIMD4Q96H15 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 KRT16P2-201ENST00000414673 1423 ntBASIC17.69■□□□□ 0.42
TIMD4Q96H15 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TIMD4Q96H15 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TIMD4Q96H15 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TIMD4Q96H15 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TIMD4Q96H15 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.67■□□□□ 0.42
TIMD4Q96H15 SLC7A5P2-201ENST00000553010 536 ntBASIC17.67■□□□□ 0.42
TIMD4Q96H15 DUX4L16-201ENST00000555130 1264 ntBASIC17.67■□□□□ 0.42
TIMD4Q96H15 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.67■□□□□ 0.42
TIMD4Q96H15 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TIMD4Q96H15 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TIMD4Q96H15 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms