Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF25Q96BH1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RNF25Q96BH1 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RNF25Q96BH1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 AP001330.3-201ENST00000520123 633 ntBASIC22.08■■□□□ 1.13
RNF25Q96BH1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.08■■□□□ 1.13
RNF25Q96BH1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RNF25Q96BH1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF25Q96BH1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RNF25Q96BH1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 AC027682.1-201ENST00000562846 899 ntBASIC22.07■■□□□ 1.12
RNF25Q96BH1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RNF25Q96BH1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RNF25Q96BH1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.06■■□□□ 1.12
RNF25Q96BH1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RNF25Q96BH1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 EDA-201ENST00000338901 1233 ntBASIC22.05■■□□□ 1.12
RNF25Q96BH1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 AC105233.4-201ENST00000642045 216 ntBASIC22.05■■□□□ 1.12
RNF25Q96BH1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RNF25Q96BH1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RNF25Q96BH1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF25Q96BH1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF25Q96BH1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF25Q96BH1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 AF213884.3-201ENST00000563833 479 ntBASIC22.04■■□□□ 1.12
RNF25Q96BH1 AL355001.2-201ENST00000620617 1191 ntBASIC22.04■■□□□ 1.12
RNF25Q96BH1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF25Q96BH1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF25Q96BH1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.04■■□□□ 1.12
RNF25Q96BH1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF25Q96BH1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RNF25Q96BH1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms