Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TMEM40Q8WWA1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 AL512625.2-201ENST00000417533 625 ntBASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 AC069236.1-201ENST00000604339 616 ntBASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 AC243732.1-201ENST00000612648 864 ntBASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TMEM40Q8WWA1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 FAM99A-202ENST00000538190 1989 ntBASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 MIR4758-201ENST00000577688 71 ntBASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TMEM40Q8WWA1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 AC008694.1-202ENST00000636953 945 ntBASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 TMEM191A-211ENST00000637163 1067 ntBASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
TMEM40Q8WWA1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 AL591742.1-201ENST00000604433 565 ntBASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TMEM40Q8WWA1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 AL162412.1-201ENST00000567129 965 ntBASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 C11orf96-202ENST00000528572 1834 ntBASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
TMEM40Q8WWA1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 RARRES2P4-201ENST00000514074 484 ntBASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 AC092118.2-201ENST00000613495 667 ntBASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM40Q8WWA1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEM40Q8WWA1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23■■□□□ 1.27
TMEM40Q8WWA1 BX276092.2-201ENST00000417668 665 ntBASIC23■■□□□ 1.27
TMEM40Q8WWA1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms