Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.9■■□□□ 1.74
SNED1Q8TER0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.9■■□□□ 1.74
SNED1Q8TER0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNED1Q8TER0 AC087742.1-201ENST00000575880 1738 ntBASIC25.9■■□□□ 1.74
SNED1Q8TER0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNED1Q8TER0 SERPINH1P1-201ENST00000419794 1249 ntBASIC25.89■■□□□ 1.74
SNED1Q8TER0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.89■■□□□ 1.74
SNED1Q8TER0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
SNED1Q8TER0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
SNED1Q8TER0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
SNED1Q8TER0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNED1Q8TER0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNED1Q8TER0 AC060766.5-201ENST00000590539 871 ntBASIC25.88■■□□□ 1.73
SNED1Q8TER0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SNED1Q8TER0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNED1Q8TER0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNED1Q8TER0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SNED1Q8TER0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.88■■□□□ 1.73
SNED1Q8TER0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNED1Q8TER0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNED1Q8TER0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNED1Q8TER0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC25.87■■□□□ 1.73
SNED1Q8TER0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNED1Q8TER0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNED1Q8TER0 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SNED1Q8TER0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.86■■□□□ 1.73
SNED1Q8TER0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNED1Q8TER0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNED1Q8TER0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.85■■□□□ 1.73
SNED1Q8TER0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNED1Q8TER0 AC091799.1-201ENST00000422823 811 ntBASIC25.85■■□□□ 1.73
SNED1Q8TER0 AL355472.2-201ENST00000422958 438 ntBASIC25.85■■□□□ 1.73
SNED1Q8TER0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.85■■□□□ 1.73
SNED1Q8TER0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SNED1Q8TER0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNED1Q8TER0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNED1Q8TER0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 FAM21FP-204ENST00000608637 956 ntBASIC25.84■■□□□ 1.73
SNED1Q8TER0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SNED1Q8TER0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SNED1Q8TER0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.83■■□□□ 1.73
SNED1Q8TER0 UBE2SP1-201ENST00000450587 669 ntBASIC25.83■■□□□ 1.73
SNED1Q8TER0 CYP2T3P-201ENST00000601990 817 ntBASIC25.83■■□□□ 1.73
SNED1Q8TER0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 HLA-B-256ENST00000639848 1089 ntBASIC25.83■■□□□ 1.73
SNED1Q8TER0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNED1Q8TER0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms