Protein–RNA interactions for Protein: Q8NHW4

CCL4L1, C-C motif chemokine 4-like, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4L1Q8NHW4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 AL138781.1-201ENST00000566567 1274 ntBASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4L1Q8NHW4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 AF201337.1-201ENST00000520239 748 ntBASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 AC105036.2-201ENST00000569468 176 ntBASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 KRT16P2-201ENST00000414673 1423 ntBASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4L1Q8NHW4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 AC142086.2-201ENST00000569753 217 ntBASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 C11orf96-202ENST00000528572 1834 ntBASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 RBM17P2-201ENST00000616397 1405 ntBASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL4L1Q8NHW4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 AC133552.2-202ENST00000575694 574 ntBASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4L1Q8NHW4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.58■□□□□ 0.88
CCL4L1Q8NHW4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL4L1Q8NHW4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCL4L1Q8NHW4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.58■□□□□ 0.88
CCL4L1Q8NHW4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 AC007322.4-201ENST00000509611 723 ntBASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4L1Q8NHW4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4L1Q8NHW4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms